RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 ZDHHC14Q8IZN3 488 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 HRASLS5Q96KN8 279 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 DDX31Q9H8H2 851 aaKnown RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 KIAA1456Q9P272 454 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 ZNF195O14628 629 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SPINT2O43291 252 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 DUSP1P28562 367 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 EDDM3BP56851 147 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TEAD2Q15562 447 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SMAD2Q15796 467 aaKnown RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 CATSPEREQ5SY80 951 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TGIF2LYQ8IUE0 185 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 LAX1Q8IWV1 398 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 CD200R1Q8TD46 325 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 LAMP3Q9UQV4 416 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 A0A087WV62 115 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 PLEKHS1Q5SXH7 462 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SELPP16109 830 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 FGF7P21781 194 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TAS2R45P59539 299 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 CXCL9Q07325 125 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SF3B4Q15427 424 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 NR0B2Q15466 257 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 C9orf135Q5VTT2 229 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 RETREG3Q86VR2 466 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SCAMP5Q8TAC9 235 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 PTTG3PQ9NZH4 202 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SNX11Q9Y5W9 270 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SCN2AQ99250 2005 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 M0R1X1 148 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 ARPC3O15145 178 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 PRAMEF4O60810 478 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 GYPAP02724 150 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 BLVRBP30043 206 aaPredicted RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 LBHQ53QV2 105 aaPredicted RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TMEM139Q8IV31 216 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SMIM7Q9BQ49 75 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 ACTR3CQ9C0K3 210 aaPredicted RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TAS2R5Q9NYW4 299 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 RNF24Q9Y225 148 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 F5H697 171 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TSPAN13O95857 204 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 RPLP1P05386 114 aaKnown RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 AKR1C3P42330 323 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SUCLG1P53597 346 aaKnown RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 MS4A2Q01362 244 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 IAH1Q2TAA2 248 aaPredicted RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SPANXN5Q5MJ07 72 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 RGMBQ6NW40 437 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 NRARPQ7Z6K4 114 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 DEFB132Q7Z7B7 95 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 GAL3ST2Q9H3Q3 398 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 C1GALT1Q9NS00 363 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 NECAP2Q9NVZ3 263 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 COL3A1P02461 1466 aaPredicted RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SULT2B1O00204 365 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TGFB1I1O43294 461 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TBX18O95935 607 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TIA1P31483 386 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 C6orf136Q5SQH8 315 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 ABHD17BQ5VST6 288 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 NAGKQ9UJ70 344 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 NOCTQ9UK39 431 aaKnown RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 PPP1R3CQ9UQK1 317 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 NFAT5O94916 1531 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 LMO7Q8WWI1 1683 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 A0A087X0M5 115 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 A0A1B0GX30 115 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SRMP19623 302 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 CCR6P51684 374 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 OLIG2Q13516 323 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 ACOT6Q3I5F7 207 aaPredicted RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 GDPGP1Q6ZNW5 385 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 OR11L1Q8NGX0 322 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 PRSS3P2Q8NHM4 247 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 RAB37Q96AX2 223 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 C11orf49Q9H6J7 331 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 TLR9Q9NR96 1032 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 HHLA2Q9UM44 414 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SVILO95425 2214 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 CDK2AP1O14519 115 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 LMO2P25791 158 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 ECI1P42126 302 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 LIMK1P53667 647 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 RPS15AP62244 130 aaKnown RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 KEAP1Q14145 624 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 BTNL3Q6UXE8 466 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 GRINAQ7Z429 371 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 MFSD6LQ8IWD5 586 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SH3RF2Q8TEC5 729 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SMG9Q9H0W8 520 aaKnown RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 SLC2A4RGQ9NR83 387 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 NXT1Q9UKK6 140 aaKnown RBP7.48□□□□□ -1.21
SCN8A-201ENST00000354534 PADI3Q9ULW8 664 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 ZNF281Q9Y2X9 895 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 NUP205Q92621 2012 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 FER1L4A9Z1Z3 1794 aa7.48□□□□□ -1.21
SCN8A-201ENST00000354534 HS3ST1O14792 307 aa7.47□□□□□ -1.21
SCN8A-201ENST00000354534 OPN1LWP04000 364 aa7.47□□□□□ -1.21
SCN8A-201ENST00000354534 ZNF25P17030 456 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms