RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 RAB1CQ92928 201 aa13.34□□□□□ -0.27
COPE-202ENST00000349893 TIMD4Q96H15 378 aa13.34□□□□□ -0.27
COPE-202ENST00000349893 PPCSQ9HAB8 311 aa13.34□□□□□ -0.27
COPE-202ENST00000349893 GRPEL1Q9HAV7 217 aa13.34□□□□□ -0.27
COPE-202ENST00000349893 SLCO1C1Q9NYB5 712 aa13.34□□□□□ -0.27
COPE-202ENST00000349893 BTNL2Q9UIR0 455 aa13.34□□□□□ -0.27
COPE-202ENST00000349893 M0R082 166 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 OR2T1O43869 369 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 FAM153BP0C7A2 387 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 B4GALT1P15291 398 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 GTF2E2P29084 291 aaKnown RBP13.33□□□□□ -0.28
COPE-202ENST00000349893 LSP1P33241 339 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 ATP4BP51164 291 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 SELENOVP59797 346 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 LCN2P80188 198 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 RAB39AQ14964 217 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 SLC9A3R2Q15599 337 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 HFEQ30201 348 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 ARMCX4Q5H9R4 360 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 FAM69AQ5T7M9 428 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 LEG1Q6P5S2 330 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 C5orf46Q6UWT4 87 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 USP51Q70EK9 711 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 H1FNTQ75WM6 255 aaPredicted RBP13.33□□□□□ -0.28
COPE-202ENST00000349893 BCL6BQ8N143 479 aaPredicted RBP13.33□□□□□ -0.28
COPE-202ENST00000349893 C4orf33Q8N1A6 199 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 CLIP4Q8N3C7 705 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 ZNF417Q8TAU3 575 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 SNX33Q8WV41 574 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 WFDC12Q8WWY7 111 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 SLC41A3Q96GZ6 507 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 TSPAN32Q96QS1 320 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 ZNF587Q96SQ5 575 aaPredicted RBP13.33□□□□□ -0.28
COPE-202ENST00000349893 FOXB1Q99853 325 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 MMP27Q9H306 513 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 LEF1Q9UJU2 399 aaPredicted RBP13.33□□□□□ -0.28
COPE-202ENST00000349893 CACNG2Q9Y698 323 aa13.33□□□□□ -0.28
COPE-202ENST00000349893 MS4A18H0YCH9 400 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 FOXH1O75593 365 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 NR2F1P10589 423 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 AQP5P55064 265 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 MS4A18Q3C1V0 323 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 SPANXN4Q5MJ08 99 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 COX20Q5RI15 118 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 C9orf139Q6ZV77 190 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 NET1Q7Z628 596 aaPredicted RBP13.32□□□□□ -0.28
COPE-202ENST00000349893 SERPINA11Q86U17 422 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 SNX32Q86XE0 403 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 ZNF519Q8TB69 540 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 SYNPRQ8TBG9 265 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 PNPT1Q8TCS8 783 aaKnown RBP13.32□□□□□ -0.28
COPE-202ENST00000349893 TAAR8Q969N4 342 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 SLC35B4Q969S0 331 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 TRIM44Q96DX7 344 aaPredicted RBP13.32□□□□□ -0.28
COPE-202ENST00000349893 GAL3ST1Q99999 423 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 SAP30LQ9HAJ7 183 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 C12orf10Q9HB07 376 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 B3GAT2Q9NPZ5 323 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 PDP1Q9P0J1 537 aaPredicted RBP13.32□□□□□ -0.28
COPE-202ENST00000349893 PURGQ9UJV8 347 aaKnown RBP13.32□□□□□ -0.28
COPE-202ENST00000349893 ZNF443Q9Y2A4 671 aaPredicted RBP13.32□□□□□ -0.28
COPE-202ENST00000349893 POFUT2Q9Y2G5 429 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 TANC2Q9HCD6 1990 aa13.32□□□□□ -0.28
COPE-202ENST00000349893 A0A1B0GUS0 222 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 CCDC154A6NI56 674 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 SNAP29O95721 258 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 HPRP00739 348 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 SHBGP04278 402 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 HLA-DOBP13765 273 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 NCF2P19878 526 aaPredicted RBP13.31□□□□□ -0.28
COPE-202ENST00000349893 GRPRP30550 384 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 ZNF154Q13106 437 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 CAMK2DQ13557 499 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 FAM209AQ5JX71 171 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 ATG16L1Q676U5 607 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 PIWIL3Q7Z3Z3 882 aaKnown RBP13.31□□□□□ -0.28
COPE-202ENST00000349893 UEVLDQ8IX04 471 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 LRRC34Q8IZ02 419 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 C17orf53Q8N3J3 647 aaPredicted RBP13.31□□□□□ -0.28
COPE-202ENST00000349893 PAQR4Q8N4S7 273 aaPredicted RBP13.31□□□□□ -0.28
COPE-202ENST00000349893 TRIML2Q8N7C3 387 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 TAF15Q92804 592 aaKnown RBP eCLIP13.31□□□□□ -0.28
COPE-202ENST00000349893 TMIGD2Q96BF3 282 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 ELMOD3Q96FG2 381 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 APOPT1Q96IL0 206 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 SPATA9Q9BWV2 254 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 AKTIPQ9H8T0 292 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 TCF7L2Q9NQB0 619 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 MMP26Q9NRE1 261 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 DECR2Q9NUI1 292 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 CALML5Q9NZT1 146 aa13.31□□□□□ -0.28
COPE-202ENST00000349893 IGKV1D-42A0A075B6H8 117 aa13.3□□□□□ -0.28
COPE-202ENST00000349893 E9PBE3 544 aa13.3□□□□□ -0.28
COPE-202ENST00000349893 UBOX5O94941 541 aa13.3□□□□□ -0.28
COPE-202ENST00000349893 MFN2O95140 757 aa13.3□□□□□ -0.28
COPE-202ENST00000349893 IGHV3-13P01766 116 aa13.3□□□□□ -0.28
COPE-202ENST00000349893 ZNF12P17014 697 aa13.3□□□□□ -0.28
COPE-202ENST00000349893 MVDP53602 400 aa13.3□□□□□ -0.28
COPE-202ENST00000349893 CLNS1AP54105 237 aaKnown RBP13.3□□□□□ -0.28
COPE-202ENST00000349893 LARS2Q15031 903 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms