RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 DHRS9Q9BPW9 319 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF649Q9BS31 505 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 EMC6Q9BV81 110 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 C1QTNF6Q9BXI9 259 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 ABCG5Q9H222 651 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 KCNN2Q9H2S1 579 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 FKRPQ9H9S5 495 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 SLC22A11Q9NSA0 550 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 NUDT15Q9NV35 164 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 CHRNA9Q9UGM1 479 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 MRTO4Q9UKD2 239 aaKnown RBP12.62□□□□□ -0.39
TRIM4-201ENST00000349062 RARRES3Q9UL19 164 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 LEUTXA8MZ59 168 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 NPIPB9F8W1W9 429 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 IL33O95760 270 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 IGHA1P01876 353 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 C1QBP02746 253 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 SPARCP09486 303 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 TALDO1P37837 337 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 EMP2P54851 167 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 OGFOD3Q6PK18 319 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 LSMEM1Q8N8F7 131 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 AKAP1Q92667 903 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRIM4-201ENST00000349062 CHIAQ9BZP6 476 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 POLE3Q9NRF9 147 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 GLTPQ9NZD2 209 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 SUSD2Q9UGT4 822 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 CEP250Q9BV73 2442 aa12.62□□□□□ -0.39
TRIM4-201ENST00000349062 PDGFAP04085 211 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF74Q16587 644 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 CHMP1BQ7LBR1 199 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 PRSS45Q7RTY3 260 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 GPAT4Q86UL3 456 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 BPHLQ86WA6 291 aaPredicted RBP12.61□□□□□ -0.39
TRIM4-201ENST00000349062 NPEPL1Q8NDH3 523 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 CCDC74BQ96LY2 380 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 TIMP4Q99727 224 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 ATF6BQ99941 703 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 RXFP3Q9NSD7 469 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 EIF3KQ9UBQ5 218 aaKnown RBP12.61□□□□□ -0.39
TRIM4-201ENST00000349062 KCNN3Q9UGI6 736 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 KLHDC2Q9Y2U9 406 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 SVILO95425 2214 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 IQCMA0A1B0GVH7 501 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 CD3GP09693 182 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 SFTPDP35247 375 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 FHL1Q13642 323 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 SHBQ15464 509 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 COL28A1Q2UY09 1125 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 ARSKQ6UWY0 536 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 D2HGDHQ8N465 521 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 DERL3Q96Q80 235 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 MMP25Q9NPA2 562 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 NCDNQ9UBB6 729 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 SUSD5O60279 629 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 SLC16A7O60669 478 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 MPZL1O95297 269 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 MAS1P04201 325 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 OR7A5Q15622 319 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 DMRTC1Q5HYR2 192 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 LRRN1Q6UXK5 716 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 ZSCAN1Q8NBB4 408 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 TRMT10AQ8TBZ6 339 aaKnown RBP12.61□□□□□ -0.39
TRIM4-201ENST00000349062 NSMAFQ92636 917 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 MRPS18AQ9NVS2 196 aaKnown RBP12.61□□□□□ -0.39
TRIM4-201ENST00000349062 LAMP5Q9UJQ1 280 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 ADAMTS9Q9P2N4 1935 aa12.61□□□□□ -0.39
TRIM4-201ENST00000349062 PRR32B1ATL7 298 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 PPM1BO75688 479 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 EIF4EP06730 217 aaKnown RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 CCL4P13236 92 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 LIMK1P53667 647 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 TRIM61Q5EBN2 209 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 CARD17Q5XLA6 110 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 LAMTOR1Q6IAA8 161 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 METAP1DQ6UB28 335 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF767PQ75MW2 155 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 MDGA2Q7Z553 956 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 LUZP2Q86TE4 346 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF485Q8NCK3 441 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ADAMTS18Q8TE60 1221 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 MR1Q95460 341 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ADIPOR1Q96A54 375 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF775Q96BV0 537 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ARL5BQ96KC2 179 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 TCRBV16S1A1N1A0A5B0 115 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 HRGP04196 525 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 CD14P08571 375 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 NRG3P56975 720 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 RNF4P78317 190 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 SIRPAP78324 504 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 IGLV3-21P80748 117 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ATG4DQ86TL0 474 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 OR1N1Q8NGS0 311 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 NOX4Q9NPH5 578 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 PPIEQ9UNP9 301 aaKnown RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 CEP192Q8TEP8 1941 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 TMED7-TICAM2A0A0A6YYA0 188 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms