RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 UCK1Q9HA47 277 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 TMEM27Q9HBJ8 222 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 NCDNQ9UBB6 729 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 FBXL21Q9UKT6 434 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 LHX6Q9UPM6 363 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 SIGLEC7Q9Y286 467 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF443Q9Y2A4 671 aaPredicted RBP9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 A0A1W2PR48 441 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 GXYLT2A0PJZ3 443 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 OR2AT4A6NND4 320 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 F5H0A9 414 aaPredicted RBP9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 NRG2O14511 850 aaPredicted RBP9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 ERAL1O75616 437 aaKnown RBP9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 CD74P04233 296 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 GTF2F2P13984 249 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 HLA-GP17693 338 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 FUT1P19526 365 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 CERS1P27544 350 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 NDUFS1P28331 727 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 EIF2S3P41091 472 aaKnown RBP9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 CCR2P41597 374 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 PGDP52209 483 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 FABP9Q0Z7S8 132 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 DUSP8Q13202 625 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 AGERQ15109 404 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 OR2B11Q5JQS5 317 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 DRAM2Q6UX65 266 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 TMPRSS11FQ6ZWK6 438 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 C2orf73Q8N5S3 287 aaPredicted RBP9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 ACOT4Q8N9L9 421 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 SLC30A7Q8NEW0 376 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 OR5AP2Q8NGF4 316 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 OR2L8Q8NGY9 312 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 OR4C6Q8NH72 309 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 ADAMTS15Q8TE58 950 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 PAQR8Q8TEZ7 354 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 TCTEX1D2Q8WW35 142 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 MS4A6EQ96DS6 147 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 C16orf58Q96GQ5 468 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 SLC25A21Q9BQT8 299 aaPredicted RBP9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 PRDM7Q9NQW5 492 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 CLDND1Q9NY35 253 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 FBXL4Q9UKA2 621 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF281Q9Y2X9 895 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF780BQ9Y6R6 833 aa9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 MDC1Q14676 2089 aaKnown RBP9.43□□□□□ -0.9
CHRNA1-202ENST00000348749 C2orf74A8MZ97 194 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 CLN5O75503 358 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 ZIC2O95409 532 aaPredicted RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 AIFM1O95831 613 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 ANXA2P07355 339 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 TMIGD3P0DMS9 266 aaPredicted RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 TPT1P13693 172 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 GPX4P36969 197 aaPredicted RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 CSNK1EP49674 416 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 RAB28P51157 221 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 CAPZA1P52907 286 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 LTBQ06643 244 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 ELAVL3Q14576 367 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 PNLIPRP3Q17RR3 467 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 DEFB115Q30KQ5 88 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 HNRNPA1L2Q32P51 320 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 GFOD2Q3B7J2 385 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 ARHGAP11BQ3KRB8 267 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 SLC6A19Q695T7 634 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 STAC2Q6ZMT1 411 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 ANKRD33Q7Z3H0 272 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 DEFB128Q7Z7B8 93 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 TMEM200AQ86VY9 491 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 SLC35F2Q8IXU6 374 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 CCDC116Q8IYX3 515 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 CDK20Q8IZL9 346 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 OR2L13Q8N349 312 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 AMER3Q8N944 861 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 SDR9C7Q8NEX9 313 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 PFN4Q8NHR9 129 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 SNX33Q8WV41 574 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 TMEM239Q8WW34 195 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 HIST1H2BAQ96A08 127 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 PIK3IP1Q96FE7 263 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF681Q96N22 645 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 CNN2Q99439 309 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 TTTY10Q9BZA0 68 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 SLITRK2Q9H156 845 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 SEC61A2Q9H9S3 476 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 DCAF16Q9NXF7 216 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 TREM2Q9NZC2 230 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 GNG8Q9UK08 70 aa9.42□□□□□ -0.9
CHRNA1-202ENST00000348749 TBC1D3EA0A087X179 549 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 NPIPB9F8W1W9 429 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MAGEB4O15481 346 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 OR2T1O43869 369 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MOSPD3O75425 235 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 IFNGP01579 166 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MT-ND4LP03901 98 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 IFI6P09912 130 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 CSRP1P21291 193 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 SDHAP31040 664 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 PPT1P50897 306 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF136P52737 540 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms