RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PRRG4Q9BZD6 226 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 FN3KQ9H479 309 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 RNF122Q9H9V4 155 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 IGSF10Q6WRI0 2623 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 A6NIZ1 184 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 WDR1O75083 606 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 TPOP07202 933 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 FCGR2AP12318 317 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 ZNF3P17036 446 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 BIDP55957 195 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 RAP1BP61224 184 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 RAP1AP62834 184 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 CDK5R2Q13319 367 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 ITGADQ13349 1161 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 CRMP1Q14194 572 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 SDR9C7Q8NEX9 313 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 OR6X1Q8NH79 312 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 CNIH3Q8TBE1 160 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 TRIB1Q96RU8 372 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 NMNAT3Q96T66 252 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 CALHM2Q9HA72 323 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 BCO1Q9HAY6 547 aa24.07■■□□□ 1.44
SSBP4-202ENST00000348495 HINT3Q9NQE9 182 aaKnown RBP24.07■■□□□ 1.44
SSBP4-202ENST00000348495 GABRA1P14867 456 aa24.06■■□□□ 1.44
SSBP4-202ENST00000348495 ABOP16442 354 aa24.06■■□□□ 1.44
SSBP4-202ENST00000348495 PTGER4P35408 488 aa24.06■■□□□ 1.44
SSBP4-202ENST00000348495 SF3B4Q15427 424 aaKnown RBP eCLIP24.06■■□□□ 1.447e-7■■■■■ 38.8
SSBP4-202ENST00000348495 TMEM201Q5SNT2 666 aa24.06■■□□□ 1.44
SSBP4-202ENST00000348495 CD163Q86VB7 1156 aa24.06■■□□□ 1.44
SSBP4-202ENST00000348495 CPT1CQ8TCG5 803 aa24.06■■□□□ 1.44
SSBP4-202ENST00000348495 ADAD1Q96M93 576 aaKnown RBP24.06■■□□□ 1.44
SSBP4-202ENST00000348495 EMC6Q9BV81 110 aa24.06■■□□□ 1.44
SSBP4-202ENST00000348495 SLC35F4A4IF30 521 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 OR6C68A6NDL8 312 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 CD8B2A6NJW9 211 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 ZNF724A8MTY0 619 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 NTF4P34130 210 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 CLDN17P56750 224 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 TEKQ02763 1124 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 OCLNQ16625 522 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 NSUN5P2Q63ZY6 315 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 RTL6Q6ICC9 239 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 KRT80Q6KB66 452 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 CYB561A3Q8NBI2 242 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 HDAC2Q92769 488 aaKnown RBP24.05■■□□□ 1.44
SSBP4-202ENST00000348495 PTP4A1Q93096 173 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 WNT2BQ93097 391 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 LRR1Q96L50 414 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 SNX18Q96RF0 628 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 KCNK17Q96T54 332 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 MRPL13Q9BYD1 178 aaKnown RBP24.05■■□□□ 1.44
SSBP4-202ENST00000348495 GP6Q9HCN6 339 aa24.05■■□□□ 1.44
SSBP4-202ENST00000348495 FIGNL2A6NMB9 653 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 XKRYO14609 159 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 GPR171O14626 319 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 ARHGEF9O43307 516 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 ZNF432O94892 652 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 AADACL4Q5VUY2 407 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 GTF2IRD2BQ6EKJ0 949 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 LEG1Q6P5S2 330 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 HDDC2Q7Z4H3 204 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 GTF2IRD2Q86UP8 949 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 JAZF1Q86VZ6 243 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 CPOQ8IVL8 374 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 TMEM45BQ96B21 275 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 HCAR1Q9BXC0 346 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 NMNAT2Q9BZQ4 307 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 VSX1Q9NZR4 365 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-202ENST00000348495 RCE1Q9Y256 329 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 SHANK1Q9Y566 2161 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 PRSS37A4D1T9 235 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 FAM183AA6NL82 134 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 TRMUO75648 421 aaKnown RBP24.04■■□□□ 1.44
SSBP4-202ENST00000348495 ACVR2AP27037 513 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 PLBD1Q6P4A8 553 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 BCDIN3DQ7Z5W3 292 aaKnown RBP24.04■■□□□ 1.44
SSBP4-202ENST00000348495 ZNF775Q96BV0 537 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-202ENST00000348495 SLC25A44Q96H78 314 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-202ENST00000348495 FAM215AQ9Y5M1 114 aa24.04■■□□□ 1.44
SSBP4-202ENST00000348495 SLC19A2O60779 497 aa24.03■■□□□ 1.44
SSBP4-202ENST00000348495 RPTNQ6XPR3 784 aa24.03■■□□□ 1.44
SSBP4-202ENST00000348495 CXXC5Q7LFL8 322 aaKnown RBP24.03■■□□□ 1.44
SSBP4-202ENST00000348495 TUSC5Q8IXB3 177 aa24.03■■□□□ 1.44
SSBP4-202ENST00000348495 TMEM123Q8N131 208 aa24.03■■□□□ 1.44
SSBP4-202ENST00000348495 OR2M2Q96R28 347 aa24.03■■□□□ 1.44
SSBP4-202ENST00000348495 EMC3Q9P0I2 261 aa24.03■■□□□ 1.44
SSBP4-202ENST00000348495 PRR23D1E9PI22 279 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-202ENST00000348495 H7C1C5 153 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 AHCYL1O43865 530 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 YES1P07947 543 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 HOXD4P09016 255 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-202ENST00000348495 PGA4P0DJD7 388 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 PGA3P0DJD8 388 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 PRR23D2P0DMB1 279 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-202ENST00000348495 LCN6P62502 163 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 C6orf141Q5SZD1 244 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 MEDAGQ5VYS4 303 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 NXNL2Q5VZ03 156 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 SEM1Q6ZVN7 128 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 ST6GALNAC3Q8NDV1 305 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms