RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 MBTPS2O43462 519 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 HIST1H1CP16403 213 aaKnown RBP13.55□□□□□ -0.24
NUP50-201ENST00000347635 GLP1RP43220 463 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 MMP15P51511 669 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 NR0B1P51843 470 aaKnown RBP13.55□□□□□ -0.24
NUP50-201ENST00000347635 GXYLT1Q4G148 440 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 BEX5Q5H9J7 111 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 FAM27D1Q5T7N8 215 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 LAIR1Q6GTX8 287 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 SLC16A9Q7RTY1 509 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 OR10K1Q8NGX5 313 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 ZNF700Q9H0M5 742 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 GJE1A6NN92 205 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 SIX6O95475 246 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 RAB3AP20336 220 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 RAD52P43351 418 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 ZNF79Q15937 498 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 TMEM244Q5VVB8 128 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 SLC51BQ86UW2 128 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 DDIT4LQ96D03 193 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 MARVELD1Q9BSK0 173 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 AUNIPQ9H7T9 357 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 FGF22Q9HCT0 170 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 SLAMF7Q9NQ25 335 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 AIPO00170 330 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 GPR171O14626 319 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 CISD3P0C7P0 127 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 MAOAP21397 527 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 CDK5R1Q15078 307 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 ABHD17BQ5VST6 288 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 TCEAL6Q6IPX3 200 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 STEAP1BQ6NZ63 245 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 ACBD4Q8NC06 268 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 DUSP18Q8NEJ0 188 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 OR2A1Q8NGT9 310 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 APMAPQ9HDC9 416 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 FLVCR2Q9UPI3 526 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 VSTM2BA6NLU5 285 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
NUP50-201ENST00000347635 ZNF14P17017 642 aaPredicted RBP13.54□□□□□ -0.24
NUP50-201ENST00000347635 CDK2P24941 298 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 OTX2P32243 289 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 RFX2P48378 723 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 DBPQ10586 325 aaPredicted RBP13.54□□□□□ -0.24
NUP50-201ENST00000347635 ERV3-1Q14264 604 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 CMIPQ8IY22 773 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 PXT1Q8NFP0 134 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 SORCS2Q96PQ0 1159 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 VRK1Q99986 396 aaPredicted RBP13.54□□□□□ -0.24
NUP50-201ENST00000347635 SLC6A17Q9H1V8 727 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 EFCAB7A8K855 629 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 ICAM2P13598 275 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 HTR2CP28335 458 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 DAP3P51398 398 aaKnown RBP13.54□□□□□ -0.24
NUP50-201ENST00000347635 VASNQ6EMK4 673 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 DPY19L4Q7Z388 723 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 IQCF2Q8IXL9 164 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 STK35Q8TDR2 534 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 PGAM5Q96HS1 289 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 ADOQ96SZ5 270 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 AIFM2Q9BRQ8 373 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 EDARQ9UNE0 448 aa13.54□□□□□ -0.24
NUP50-201ENST00000347635 TRAV1-2A0A0B4J238 106 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 H7C417 338 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 ZNF264O43296 627 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 SEC61A1P61619 476 aaKnown RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 CLPPQ16740 277 aaPredicted RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 PAQR8Q8TEZ7 354 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 THAP3Q8WTV1 239 aaPredicted RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 GPATCH2Q9NW75 528 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 SIP14410 1827 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 A0A1B0GUH1 482 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 SGCAQ16586 387 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 DCAF12Q5T6F0 453 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 AGBL4Q5VU57 503 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 OR51D1Q8NGF3 324 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 OR5T3Q8NGG3 340 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 MAP6Q96JE9 813 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 TEX101Q9BY14 249 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 EIF5A2Q9GZV4 153 aaKnown RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 SIRT3Q9NTG7 399 aaPredicted RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 MMACHCQ9Y4U1 282 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 MAGEB4O15481 346 aaPredicted RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 EPXP11678 715 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 ITGB8P26012 769 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 HERV-K104P61576 105 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 GALK2Q01415 458 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 SPIN3Q5JUX0 258 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 SLC35D2Q76EJ3 337 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 OR14A16Q8NHC5 309 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 DIO2Q92813 273 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 HOXB13Q92826 284 aaPredicted RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 DVL3Q92997 716 aaPredicted RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 MAN2C1Q9NTJ4 1040 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 PPM1DO15297 605 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 TRHRP34981 398 aaPredicted RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 SLC6A20Q9NP91 592 aa13.53□□□□□ -0.24
NUP50-201ENST00000347635 GPR55Q9Y2T6 319 aaPredicted RBP13.53□□□□□ -0.24
NUP50-201ENST00000347635 CD14P08571 375 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms