RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 EFNA3P52797 238 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 BAIAP2L2Q6UXY1 529 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 CCDC28AQ8IWP9 274 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 FCAMRQ8WWV6 532 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 PIGCQ92535 297 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF700Q9H0M5 742 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 HMX3A6NHT5 357 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 M0R1B8 84 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 MT-ND4P03905 459 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 OPN1LWP04000 364 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 GSTP1P09211 210 aaKnown RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ETV5P41161 510 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ETV1P50549 477 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 CEBPGP53567 150 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 METAP1P53582 386 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 STOML3Q8TAV4 291 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 C3orf49Q96BT1 292 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF471Q9BX82 626 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 MGAT4CQ9UBM8 478 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ERP29P30040 261 aaKnown RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ARR3P36575 388 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 SSPNQ14714 243 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 SMRP1Q8NCR6 262 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 SLC35B4Q969S0 331 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 FYTTD1Q96QD9 318 aaKnown RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 FAM173AQ9BQD7 235 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 FOLH1BQ9HBA9 442 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 NPFFR2Q9Y5X5 522 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ALG5Q9Y673 324 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 URB1O60287 2271 aaKnown RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 CNTRLQ7Z7A1 2325 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 A0A087WZY1 265 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 TRBV5-4A0A0C4DH59 114 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 FAM230AA0A1W2PPH8 454 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 SERINC4A6NH21 518 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 H7C1Q1 480 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 IL1AP01583 271 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 TACR3P29371 465 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 RAB35Q15286 201 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 METRNLQ641Q3 311 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 POGLUT1Q8NBL1 392 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 IL17RDQ8NFM7 739 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 OR56B2PQ8NGI1 322 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 TMEM255BQ8WV15 326 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 CNOT9Q92600 299 aaKnown RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 FOXN4Q96NZ1 517 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 MBNL1Q9NR56 388 aaKnown RBP10.01□□□□□ -0.81
CLCN6-202ENST00000346436 OSGIN1Q9UJX0 560 aa10.01□□□□□ -0.81
CLCN6-202ENST00000346436 ZFC3H1O60293 1989 aaKnown RBP10□□□□□ -0.81
CLCN6-202ENST00000346436 BRWD3Q6RI45 1802 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 TRAV36DV7A0A075B6V5 113 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 MEIS3P1A6NDR6 274 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 C5orf67F2Z3F1 127 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 PRSS23O95084 383 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 KIAA0040Q15053 153 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 CALHM3Q86XJ0 350 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 OR13C2Q8NGS9 318 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 ASB17Q8WXJ9 295 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 SLC41A2Q96JW4 573 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 MS4A8Q9BY19 250 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 GABARAPL1Q9H0R8 117 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 GNG12Q9UBI6 72 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 TRGV5A0A0B4J1U4 118 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 CXorf51AA0A1B0GTR3 108 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 SERPINA5P05154 406 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 CATR1Q13166 79 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 PGGHGQ32M88 737 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 MED25Q71SY5 747 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 GLCCI1Q86VQ1 547 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 FOXRED2Q8IWF2 684 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 SPERTQ8NA61 448 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 SPIN2AQ99865 258 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 SPIN2BQ9BPZ2 258 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 POTEKPQ9BYX7 375 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 SYNPO2LQ9H987 977 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 ATG4BQ9Y4P1 393 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 ARID2Q68CP9 1835 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 TMED7-TICAM2A0A0A6YYA0 188 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 SPAARA0A1B0GVQ0 90 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 POM121BA6NF01 834 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 DBHP09172 617 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 GIFP27352 417 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 APOBEC1P41238 236 aaKnown RBP10□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF169Q14929 603 aaPredicted RBP10□□□□□ -0.81
CLCN6-202ENST00000346436 FHL5Q5TD97 284 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 ACSM5Q6NUN0 579 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 OR5D14Q8NGL3 314 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 RND1Q92730 232 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 NIPAL2Q9H841 368 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 FBXO8Q9NRD0 319 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 MED11Q9P086 117 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 TMED7Q9Y3B3 224 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 IER3IP1Q9Y5U9 82 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 OR1C1Q15619 314 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 ACSM3Q53FZ2 586 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 FAM83HQ6ZRV2 1179 aaPredicted RBP10□□□□□ -0.81
CLCN6-202ENST00000346436 OR51T1Q8NGJ9 327 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 NEURL3Q96EH8 262 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 SLC25A44Q96H78 314 aaPredicted RBP10□□□□□ -0.81
CLCN6-202ENST00000346436 TMEM38AQ9H6F2 299 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms