RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 HAVCR2Q8TDQ0 301 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 VN1R1Q9GZP7 353 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 NKIRAS2Q9NYR9 191 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 CAMK2AQ9UQM7 478 aa13.5□□□□□ -0.25
VIPAS39-202ENST00000343765 TCRBV16S1A1N1A0A5B0 115 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 C1QBP02746 253 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 TACSTD2P09758 323 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 GDNFP39905 211 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 BIKQ13323 160 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ALKBH1Q13686 389 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 TIGD3Q6B0B8 471 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 THAP3Q8WTV1 239 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 LIPHQ8WWY8 451 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 MAP6Q96JE9 813 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 CCNL2Q96S94 520 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ADAM19Q9H013 955 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ZCCHC4Q9H5U6 513 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 TCF7L1Q9HCS4 588 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ZNF222Q9UK12 451 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 MOKQ9UQ07 419 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 TRABD2BA6NFA1 517 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 AIPO00170 330 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 DUX1O43812 170 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ITGA10O75578 1167 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 APEHP13798 732 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ABCD3P28288 659 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 BTG1P62324 171 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 FAM199XQ6PEV8 388 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC35D2Q76EJ3 337 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC29A4Q7RTT9 530 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 CDC20BQ86Y33 519 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 OR51A4Q8NGJ6 313 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ZFAND1Q8TCF1 268 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 NSMAFQ92636 917 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ATOH1Q92858 354 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 DAZLQ92904 295 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC25A38Q96DW6 304 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 AMELYQ99218 206 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 KCNG2Q9UJ96 466 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 V9GY05 133 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 C2orf72A6NCS6 295 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 PDCD5O14737 125 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 RAD1O60671 282 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 MAS1P04201 325 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 GP1BBP13224 206 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC6A8P48029 635 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC6A19Q695T7 634 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 PLXDC1Q8IUK5 500 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 ZNF676Q8N7Q3 588 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 CADM4Q8NFZ8 388 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 OR11A1Q9GZK7 315 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 GTF2A1LQ9UNN4 478 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 HSPB11Q9Y547 144 aa13.49□□□□□ -0.25
VIPAS39-202ENST00000343765 XKRYO14609 159 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 CD1AP06126 327 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 EPHA4P54764 986 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 RPS15P62841 145 aaKnown RBP13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 SNTB2Q13425 540 aaKnown RBP13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 SFRP4Q6FHJ7 346 aaPredicted RBP13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 METTL21AQ8WXB1 218 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 PIGKQ92643 395 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 INTS14Q96SY0 518 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 UBE2ZQ9H832 354 aaPredicted RBP13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 TAS2R5Q9NYW4 299 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 RCE1Q9Y256 329 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 NUBP2Q9Y5Y2 271 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 CNTRLQ7Z7A1 2325 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 SUSD5O60279 629 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 TSPAN2O60636 221 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 ABHD16AO95870 558 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 TXNDC12O95881 172 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 BGLAPP02818 100 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 Q499Y3 187 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 STAC2Q6ZMT1 411 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 TMPRSS12Q86WS5 348 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 SYNPRQ8TBG9 265 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 RPS4Y2Q8TD47 263 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 SMIM4Q8WVI0 70 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 ADAMTS14Q8WXS8 1223 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 MVB12AQ96EY5 273 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 KLHL15Q96M94 604 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 NDEL1Q9GZM8 345 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 CHRNA10Q9GZZ6 450 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 RAB33BQ9H082 229 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 SLA2Q9H6Q3 261 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 FGF21Q9NSA1 209 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 PCNX3Q9H6A9 2034 aa13.48□□□□□ -0.25
VIPAS39-202ENST00000343765 TRAV36DV7A0A075B6V5 113 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 FABP7O15540 132 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 TSC22D2O75157 780 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 IGF2P01344 180 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 ADRA2CP18825 462 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 STOMP27105 288 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 DPP4P27487 766 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 LRRN1Q6UXK5 716 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 KDM8Q8N371 416 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC25A45Q8N413 288 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 OR11H7Q8NGC8 314 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms