RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 FFAR1O14842 300 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 P04436 131 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 GNRHRP30968 328 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 DRD3P35462 400 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 CXCL12P48061 93 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 HTR4Q13639 388 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 GLYATL3Q5SZD4 288 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 YOD1Q5VVQ6 348 aaPredicted RBP6.6□□□□□ -1.35
VCAN-202ENST00000342785 OVCH1Q7RTY7 1134 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SIRT6Q8N6T7 355 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 TMEM185AQ8NFB2 350 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 OR51T1Q8NGJ9 327 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 ARHGDIGQ99819 225 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 GSX2Q9BZM3 304 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 EMC7Q9NPA0 242 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 HRO43593 1189 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 CTSVO60911 334 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SOD1P00441 154 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 GK2Q14410 553 aaPredicted RBP6.6□□□□□ -1.35
VCAN-202ENST00000342785 RSU1Q15404 277 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 STEAP1BQ6NZ63 245 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 VN1R4Q7Z5H5 301 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 ZNF454Q8N9F8 522 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 PLPP7Q8NBV4 271 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 ZNF784Q8NCA9 323 aaPredicted RBP6.6□□□□□ -1.35
VCAN-202ENST00000342785 OR7G1Q8NGA0 311 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SEC22AQ96IW7 307 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 ST6GALNAC5Q9BVH7 336 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 KCND3Q9UK17 655 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 TNFRSF10AO00220 468 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 DVL2O14641 736 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 PLRG1O43660 514 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 NSA2O95478 260 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 IL33O95760 270 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 IGHG1P01857 330 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 GAAP10253 952 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 CSNK1A1P48729 337 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 POLR2HP52434 150 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 ZNF616Q08AN1 781 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 GNMTQ14749 295 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 BEX5Q5H9J7 111 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 C1orf140Q5VVS0 124 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 OR14L1PQ8NHC6 308 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 SMIM19Q96E16 107 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 BORCS8Q96FH0 119 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 EMC9Q9Y3B6 208 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 TRIP11Q15643 1979 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 P2RX6O15547 441 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 ZNF749O43361 778 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 SIX6O95475 246 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 CLUP10909 449 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 PPICP45877 212 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 SNU13P55769 128 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 MPEG1Q2M385 716 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 FCRL6Q6DN72 434 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 RDH10Q8IZV5 341 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 CD300LFQ8TDQ1 290 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 DVL3Q92997 716 aaPredicted RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 SFXN2Q96NB2 322 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 NXF5Q9H1B4 397 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 TRBV11-1A0A0K0K1C0 115 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 GABARAPH6UMI1 98 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 ELAVL1Q15717 326 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 AADACL4Q5VUY2 407 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 C5orf46Q6UWT4 87 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 OR2L13Q8N349 312 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 FAM160A2Q8N612 972 aaPredicted RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 OR6M1Q8NGM8 313 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 OR8D4Q8NGM9 314 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 DCUN1D4Q92564 292 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 WDFY2Q96P53 400 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 CHRDQ9H2X0 955 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 PLSCR3Q9NRY6 295 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 PARPBPQ9NWS1 579 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 IFITM5A6NNB3 132 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 ALX3O95076 343 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 TAS2R31P59538 309 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 HTRA4P83105 476 aaPredicted RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 LSM11P83369 360 aaKnown RBP eCLIP6.59□□□□□ -1.35
VCAN-202ENST00000342785 MLF2Q15773 248 aaPredicted RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 CD300LDQ6UXZ3 194 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 PPP1R3BQ86XI6 285 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 EID2Q8N6I1 236 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 BOLLQ8N9W6 283 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 ZFAND1Q8TCF1 268 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 RPP25Q9BUL9 199 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 SIGLEC7Q9Y286 467 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 ETV7Q9Y603 341 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 PAPPA2Q9BXP8 1791 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 FITM1A5D6W6 292 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 BCAT2O15382 392 aaPredicted RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 BRINP1O60477 761 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 EIF4EP06730 217 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 GABRB1P18505 474 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 IFITM3Q01628 133 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 CAMK2DQ13557 499 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 ESCO2Q56NI9 601 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 Q6ZTK2 550 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 BCORP1Q8N888 145 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 OR4N2Q8NGD1 307 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms