RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 GDF9O60383 454 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 F13BP05160 661 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 YES1P07947 543 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 APEHP13798 732 aaKnown RBP13.6□□□□□ -0.23
TPM3-208ENST00000341485 TACR3P29371 465 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 RAB25P57735 213 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 NANOS3P60323 173 aaKnown RBP13.6□□□□□ -0.23
TPM3-208ENST00000341485 MC2RQ01718 297 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 ZNF385CQ66K41 422 aaPredicted RBP13.6□□□□□ -0.23
TPM3-208ENST00000341485 LANCL3Q6ZV70 420 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 BMPERQ8N8U9 685 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 HAVCR2Q8TDQ0 301 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 METTL21AQ8WXB1 218 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 CREB3L1Q96BA8 519 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 GAL3ST4Q96RP7 486 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 CMKLR1Q99788 373 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 NRSN2Q9GZP1 204 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 LAT2Q9GZY6 243 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 ABCG5Q9H222 651 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 GALNT9Q9HCQ5 603 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 NOX4Q9NPH5 578 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 BRD7Q9NPI1 651 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 COPS7AQ9UBW8 275 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 KLHDC2Q9Y2U9 406 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 CACNG2Q9Y698 323 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 A0A087WV48 116 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 C17orf51A8MQB3 221 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 MEN1O00255 615 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 GPRIN2O60269 458 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 TXNDC12O95881 172 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 SDHAP31040 664 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 CCKBRP32239 447 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 SRP9P49458 86 aaKnown RBP13.6□□□□□ -0.23
TPM3-208ENST00000341485 FOXL2P58012 376 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 ZNF117Q03924 483 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 RPL18Q07020 188 aaKnown RBP13.6□□□□□ -0.23
TPM3-208ENST00000341485 NDUFA5Q16718 116 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 SLC36A2Q495M3 483 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 ESPNLQ6ZVH7 1005 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 SLC16A9Q7RTY1 509 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 SUMF1Q8NBK3 374 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 ZNF563Q8TA94 476 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 RGP1Q92546 391 aaPredicted RBP13.6□□□□□ -0.23
TPM3-208ENST00000341485 YIPF5Q969M3 257 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 GFI1Q99684 422 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 SLC39A1Q9NY26 324 aa13.6□□□□□ -0.23
TPM3-208ENST00000341485 CDC14CA4D256 554 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 ACOD1A6NK06 481 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 H7C1C5 153 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 DCTN6O00399 190 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 GMFGO60234 142 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 UBL3O95164 117 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 MAGEB1P43366 347 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 LCN6P62502 163 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 DGCR2P98153 550 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 RNASE12Q5GAN4 147 aaKnown RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 HLA-DQA1Q5Y7H0 255 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 TIGD3Q6B0B8 471 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 C9orf40Q8IXQ3 194 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 TAAR8Q969N4 342 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 TSPAN32Q96QS1 320 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 STRADBQ9C0K7 418 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 ANKRD10Q9NXR5 420 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 GPN3Q9UHW5 284 aaPredicted RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 MRTO4Q9UKD2 239 aaKnown RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 SPATA2Q9UM82 520 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 ZNF281Q9Y2X9 895 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 OR6C70A6NIJ9 312 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 ALOX12BO75342 701 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 ONECUT2O95948 504 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 KLK3P07288 261 aaPredicted RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 CD3GP09693 182 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 ZNF28P17035 718 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 EMP2P54851 167 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 RRAS2P62070 204 aaPredicted RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 BTG1P62324 171 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 EFR3AQ14156 821 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 EBPQ15125 230 aaKnown RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 TOMM34Q15785 309 aaPredicted RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 Q5BKY6 102 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 MESTQ5EB52 335 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 HACD4Q5VWC8 232 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 KRT74Q7RTS7 529 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 NANOGNBQ7Z5D8 188 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 TIGD4Q8IY51 512 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 ASCC1Q8N9N2 400 aaKnown RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 LGALS14Q8TCE9 139 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 HSD17B8Q92506 261 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 PHYHIPQ92561 330 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 DERL3Q96Q80 235 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 TMEM246Q9BRR3 403 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 ULBP3Q9BZM4 244 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 SLC25A18Q9H1K4 315 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 SRA1Q9HD15 236 aaKnown RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 MCUBQ9NWR8 336 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 TEKT2Q9UIF3 430 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 MOKQ9UQ07 419 aa13.59□□□□□ -0.23
TPM3-208ENST00000341485 PCDHGA9Q9Y5G4 932 aaKnown RBP13.59□□□□□ -0.23
TPM3-208ENST00000341485 TMEM72A0PK05 275 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms