RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 SMAD9O15198 467 aaKnown RBP8.58□□□□□ -1.04
NECAP1-201ENST00000339754 OR1F1O43749 312 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 CTAG2O75638 210 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 FARS2O95363 451 aaKnown RBP8.58□□□□□ -1.04
NECAP1-201ENST00000339754 RPN2P04844 631 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 KLK3P07288 261 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-201ENST00000339754 HLA-GP17693 338 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 EPHB3P54753 998 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 REEP5Q00765 189 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 IRF4Q15306 451 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 TCTN1Q2MV58 587 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 FNDC3BQ53EP0 1204 aaKnown RBP8.58□□□□□ -1.04
NECAP1-201ENST00000339754 FAM46CQ5VWP2 391 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 SLC8B1Q6J4K2 584 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 LPCAT3Q6P1A2 487 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 IL34Q6ZMJ4 242 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 ETV3LQ6ZN32 361 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 TMED4Q7Z7H5 227 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 POMGNT2Q8NAT1 580 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 SLC16A11Q8NCK7 471 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 OR52E2Q8NGJ4 325 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 OR5AR1Q8NGP9 310 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 OR1J2Q8NGS2 313 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 OR2A12Q8NGT7 310 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 CPNE2Q96FN4 548 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-201ENST00000339754 TRMT2BQ96GJ1 504 aaKnown RBP8.58□□□□□ -1.04
NECAP1-201ENST00000339754 KLHL31Q9H511 634 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 PRSS16Q9NQE7 514 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 SERTAD3Q9UJW9 196 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 CES1P1Q9UKY3 287 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 ASF1AQ9Y294 204 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 PLEKHA6Q9Y2H5 1048 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 ATG4BQ9Y4P1 393 aa8.58□□□□□ -1.04
NECAP1-201ENST00000339754 GXYLT2A0PJZ3 443 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 WASH3PC4AMC7 463 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PSMD9O00233 223 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 FKTNO75072 461 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PSMB5P28074 263 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 CD34P28906 385 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 EIF2S3P41091 472 aaKnown RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 SSR2P43308 183 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 F2RL1P55085 397 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 GAS6Q14393 721 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 ATPAF1Q5TC12 328 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 TXNDC8Q6A555 127 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 NDUFAF7Q7L592 441 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 TMEM200AQ86VY9 491 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 CDK20Q8IZL9 346 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 GABRG1Q8N1C3 465 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 WDSUB1Q8N9V3 476 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 OR10R2Q8NGX6 335 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 SLC25A21Q9BQT8 299 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 ACTRT3Q9BYD9 372 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 LAT2Q9GZY6 243 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 SEC61A2Q9H9S3 476 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 CYTL1Q9NRR1 136 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 UPB1Q9UBR1 384 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 YBX2Q9Y2T7 364 aaKnown RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 TRAV18A0A075B6X5 111 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 C4orf51C9J302 202 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PHYHO14832 338 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PPIHO43447 177 aaKnown RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PQBP1O60828 265 aaKnown RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 WNT11O96014 354 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 GNRH1P01148 92 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 RNF224P0DH78 156 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PRSS3P35030 304 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 CSNK1EP49674 416 aaKnown RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 ZNF124Q15973 351 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 SGCAQ16586 387 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 ALG11Q2TAA5 492 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 CDNFQ49AH0 187 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PRRT3Q5FWE3 981 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 C9orf152Q5JTZ5 239 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 NKAPLQ5M9Q1 402 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 ZNF684Q5T5D7 378 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 TMCO2Q7Z6W1 182 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 RANBP3LQ86VV4 465 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 TMPRSS12Q86WS5 348 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 TRAPPC5Q8IUR0 188 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 ZNF547Q8IVP9 402 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 DCUN1D3Q8IWE4 304 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 BAP18Q8IXM2 172 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 SLC35F3Q8IY50 421 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 OR9A2Q8NGT5 310 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 OR4K13Q8NH42 304 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PHOSPHO2Q8TCD6 241 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 GTF3AQ92664 365 aaKnown RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 FGF13Q92913 245 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 RAD51AP1Q96B01 352 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 EDEM2Q9BV94 578 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 OR2AG1Q9H205 316 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 C6orf106Q9H6K1 298 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-201ENST00000339754 RHOFQ9HBH0 211 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 PCDHGA1Q9Y5H4 931 aa8.57□□□□□ -1.04
NECAP1-201ENST00000339754 TRAV8-7A0A075B6U6 113 aa8.56□□□□□ -1.04
NECAP1-201ENST00000339754 CXorf51AA0A1B0GTR3 108 aa8.56□□□□□ -1.04
NECAP1-201ENST00000339754 RNASEK-C17orf49H0YIS7 233 aa8.56□□□□□ -1.04
NECAP1-201ENST00000339754 CD14P08571 375 aa8.56□□□□□ -1.04
NECAP1-201ENST00000339754 ZNF735P0CB33 412 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms