RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 C19orf25Q9UFG5 118 aaPredicted RBP6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 PADI1Q9ULC6 663 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 PCDHGB6Q9Y5F9 930 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 WIF1Q9Y5W5 379 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A0B4J203 849 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC16A7O60669 478 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 DXOO77932 396 aaKnown RBP6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 WNT11O96014 354 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 OR2T7P0C7T2 308 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 RPS11P62280 158 aaKnown RBP eCLIP6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 SIRPAP78324 504 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 PSPHP78330 225 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 GGTLC2Q14390 218 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 SGCBQ16585 318 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 PLPPR5Q32ZL2 321 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 MAMDC2Q7Z304 686 aaPredicted RBP6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 NUP54Q7Z3B4 507 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 NAXDQ8IW45 347 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 OR2T27Q8NH04 317 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 CHPT1Q8WUD6 406 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 RNF138Q8WVD3 245 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 OIT3Q8WWZ8 545 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 CCNL2Q96S94 520 aaPredicted RBP6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 C12orf10Q9HB07 376 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 B3GAT2Q9NPZ5 323 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 KCNG2Q9UJ96 466 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 TCFL5Q9UL49 500 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 GSTK1Q9Y2Q3 226 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 V9GYH0 126 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 MUC6Q6W4X9 2439 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A075B6Q4 140 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 NSG1A0A0A6YYJ2 146 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A0G2JMM0 328 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 TRBV2A0A0J9YWF9 115 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A1W2PPB8 328 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A1W2PRS3 328 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 KIR3DP1A8MWS1 328 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 LOC110117498-PIK3R3F6TDL0 507 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 H0YC42 278 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 IDH3BO43837 385 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 DOK2O60496 412 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 HPGDSO60760 199 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 UPK1BO75841 260 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 AHSA1O95433 338 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 PAHP00439 452 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 IGF2P01344 180 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 OCM2P0CE71 109 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 OCMP0CE72 109 aaPredicted RBP6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC2A2P11168 524 aaPredicted RBP6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 IFNGR1P15260 489 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 SPNP16150 400 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 MYBPHQ13203 477 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 OXA1LQ15070 435 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 ACSM3Q53FZ2 586 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 SPANXN2Q5MJ10 180 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 LINC00299Q6ZSB3 139 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 OR6N2Q8NGY6 317 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 CT55Q8WUE5 264 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 THAP4Q8WY91 577 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 TTC9Q92623 222 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC30A2Q9BRI3 323 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF700Q9H0M5 742 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 INIPQ9NRY2 104 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 MRPL22Q9NWU5 206 aaKnown RBP6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 PEX16Q9Y5Y5 336 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 A3GALT2U3KPV4 340 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 CEP250Q9BV73 2442 aa6.65□□□□□ -1.34
SRFBP1-201ENST00000339397 PRSS37A4D1T9 235 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 RAD1O60671 282 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 TXNDC12O95881 172 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 HLA-DQA2P01906 255 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 JMJD7P0C870 316 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF883P0CG24 379 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 TGM1P22735 817 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 GDI2P50395 445 aaKnown RBP6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 RPL27P61353 136 aaKnown RBP6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 IL10RAQ13651 578 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 P2RY14Q15391 338 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 CARTPTQ16568 116 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC25A35Q3KQZ1 300 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 CDONQ4KMG0 1287 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 ARMC4Q5T2S8 1044 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF684Q5T5D7 378 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 EEF1A1P5Q5VTE0 462 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 LIPNQ5VXI9 398 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 PPP1R32Q7Z5V6 425 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 RPS19BP1Q86WX3 136 aaKnown RBP6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 C7orf57Q8NEG2 295 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 OR2M3Q8NG83 312 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF519Q8TB69 540 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC22A8Q8TCC7 542 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 THEM6Q8WUY1 208 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 TMEM234Q8WY98 164 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 NXPE2Q96DL1 559 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 CEP19Q96LK0 163 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 ADAD1Q96M93 576 aaKnown RBP6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 LRFN5Q96NI6 719 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 OR14A2Q96R54 314 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 ATF6BQ99941 703 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms