RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PRSS57Q6UWY2 283 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 METTL7BQ6UX53 244 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 KIR2DL5AQ8N109 375 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 OR6K2Q8NGY2 324 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 OR5AK2Q8NH90 309 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF417Q8TAU3 575 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ATG101Q9BSB4 218 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PBX4Q9BYU1 374 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ZBP1Q9H171 429 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF552Q9H707 407 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 LRTM1Q9HBL6 345 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SHPKQ9UHJ6 478 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ASPDHA6ND91 283 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 FMO6PO60774 539 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CST4P01036 141 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 C4BPAP04003 597 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GPX2P18283 190 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TNFSF4P23510 183 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CNR2P34972 360 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 BLKP51451 505 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GTF2A2P52657 109 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 UBE2MP61081 183 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RPL38P63173 70 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RPE65Q16518 533 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CST9Q5W186 159 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC24A5Q71RS6 500 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GLB1L2Q8IW92 636 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF100Q8IYN0 542 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SH3RF2Q8TEC5 729 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 MS4A6EQ96DS6 147 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 MRGPRX1Q96LB2 322 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SGPP1Q9BX95 441 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CUTCQ9NTM9 273 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SEMA4GQ9NTN9 838 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GULP1Q9UBP9 304 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 NME6O75414 186 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ERAL1O75616 437 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SCGNO76038 276 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TOMM40O96008 361 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR3A2P47893 321 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 PSG6Q00889 435 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 PAX5Q02548 391 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 BCL2L1Q07817 233 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM268Q5VZI3 342 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 DCAF15Q66K64 600 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 C18orf63Q68DL7 685 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 LAIR1Q6GTX8 287 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GDF6Q6KF10 455 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TRIM40Q6P9F5 258 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 WDR74Q6RFH5 385 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM205Q6UW68 189 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 LCTLQ6UWM7 567 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TGIF2LYQ8IUE0 185 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF567Q8N184 647 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 LIPHQ8WWY8 451 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RCC1LQ96I51 464 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR10A5Q9H207 317 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CISHQ9NSE2 258 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM242Q9NWH2 141 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF586Q9NXT0 402 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TSPAN16Q9UKR8 245 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RNF24Q9Y225 148 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RASD1Q9Y272 281 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RAI2Q9Y5P3 530 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CICQ96RK0 1608 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TRBV5-3A0A0A0MS03 114 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 FAM86B1E9PN63 330 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 FRS3O43559 492 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GAPDHP04406 335 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 EIF4EP06730 217 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SMPD1P17405 629 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 MMP11P24347 488 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF41P51814 821 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 NSDHLQ15738 373 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 PGGHGQ32M88 737 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ELOA3BQ3SY89 546 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 XKR6Q5GH73 641 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 THOC6Q86W42 341 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RYBPQ8N488 228 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 C17orf78Q8N4C9 275 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 FAM86B1Q8N7N1 296 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ELOA3Q8NG57 546 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR11G2Q8NGC1 345 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR13C4Q8NGS5 318 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR1P1Q8NH06 330 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 MFSD8Q8NHS3 518 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 FAM151AQ8WW52 585 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CTHRC1Q96CG8 243 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 PGLYRP2Q96PD5 576 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR5B12Q96R08 314 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 MRPL45Q9BRJ2 306 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 NDC1Q9BTX1 674 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 DUOX1Q9NRD9 1551 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 MYH15Q9Y2K3 1946 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GABRR3A8MPY1 467 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC17A3O00476 420 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SCAMP2O15127 329 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 PLPP2O43688 288 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 LEFTY1O75610 366 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms