RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 LOXL2Q9Y4K0 774 aa4.81□□□□□ -1.64
PRPF4B-201ENST00000337659 PRR23D1E9PI22 279 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 GTPBP1O00178 669 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 VAMP5O95183 116 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ALDOBP05062 364 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 PRR23D2P0DMB1 279 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 CD79BP40259 229 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SSBP1Q04837 148 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ERV3-1Q14264 604 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 HSD17B12Q53GQ0 312 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 AGAP7PQ5VUJ5 663 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NSUN5P2Q63ZY6 315 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 PAQR6Q6TCH4 344 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ANGPTL8Q6UXH0 198 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 OAFQ86UD1 273 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 IGFN1Q86VF2 1251 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 CPOQ8IVL8 374 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 DUSP18Q8NEJ0 188 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 MOSPD2Q8NHP6 518 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NSMAFQ92636 917 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 OR8B4Q96RC9 309 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 STRADBQ9C0K7 418 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 DCSTAMPQ9H295 470 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ZDHHC11Q9H8X9 412 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 CTPS2Q9NRF8 586 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 CYSLTR2Q9NS75 346 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 TVP23BQ9NYZ1 205 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 DNAJC27Q9NZQ0 273 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SPIN1Q9Y657 262 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NPIPA5A0A0B4J1W7 369 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 A0A1W2PQL4 384 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 OR4C45A6NMZ5 311 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 RIIAD1A6NNX1 92 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF716A6NP11 495 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NPIPA7E9PJI5 369 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC19A2O60779 497 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SERPINA3P01011 423 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 MT-ND5P03915 603 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NPIPA8P0DM63 369 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 CNR1P21554 472 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 F8A1P23610 371 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NOS3P29474 1203 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 RPS19P39019 145 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 MMP16P51512 607 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 RAG2P55895 527 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SNAPC1Q16533 368 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 HBMQ6B0K9 141 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ASCL4Q6XD76 172 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 H1FNTQ75WM6 255 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SSX6Q7RTT6 188 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 MARCH3Q86UD3 253 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 C20orf196Q8IYI0 205 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 STX19Q8N4C7 294 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 DEFB119Q8N690 84 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 COL26A1Q96A83 441 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 MRPL48Q96GC5 212 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ALG8Q9BVK2 526 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 WDR76Q9H967 626 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 G6PC2Q9NQR9 355 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NCDNQ9UBB6 729 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 CYB5R1Q9UHQ9 305 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 MRM2Q9UI43 246 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 COPS3Q9UNS2 423 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 PCDHGA9Q9Y5G4 932 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ARID1BQ8NFD5 2236 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 TRABD2BA6NFA1 517 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF724A8MTY0 619 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NME2P1O60361 137 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SOX14O95416 240 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 PPP1R3DO95685 299 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 HLA-DPB1P04440 258 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 CALCBP10092 127 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SAGP10523 405 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 NME2P22392 152 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 IL12BP29460 328 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SERPINB10P48595 397 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 GSK3AP49840 483 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 QRFPP83859 136 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 C1orf100Q5SVJ3 147 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 TMPRSS11AQ6ZMR5 421 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 DCDC5Q6ZRR9 648 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 GATAD2AQ86YP4 633 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 PLCZ1Q86YW0 608 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC35F2Q8IXU6 374 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ZIC4Q8N9L1 334 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ZPLD1Q8TCW7 415 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 TRIM63Q969Q1 353 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 PLEKHA8Q96JA3 519 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 DCLRE1CQ96SD1 692 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 MIR1-1HGQ9H1L0 117 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 OR51E2Q9H255 320 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ADNPQ9H2P0 1102 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 BCO1Q9HAY6 547 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SEBOXQ9HB31 216 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ZBTB20Q9HC78 741 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 ABRACLQ9P1F3 81 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 AASSQ9UDR5 926 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC13A4Q9UKG4 626 aa4.8□□□□□ -1.64
PRPF4B-201ENST00000337659 B9D1Q9UPM9 204 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms