RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 PIEZO1Q92508 2521 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 TRAV17A0A0B4J275 112 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 LINC01387J3KSC0 135 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 ACOT7O00154 380 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 SEC14L2O76054 403 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 PYCR1P32322 319 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 TTKP33981 857 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 SUCLG1P53597 346 aaKnown RBP13.15□□□□□ -0.3
CBX3-201ENST00000337620 PMP22Q01453 160 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 RUNX1T1Q06455 604 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 C1DQ13901 141 aaKnown RBP13.15□□□□□ -0.3
CBX3-201ENST00000337620 SLC10A1Q14973 349 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 GPR107Q5VW38 600 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 ESPNLQ6ZVH7 1005 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 LHFPL3Q86UP9 236 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 CLVS1Q8IUQ0 354 aaPredicted RBP13.15□□□□□ -0.3
CBX3-201ENST00000337620 ZADH2Q8N4Q0 377 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 PROKR2Q8NFJ6 384 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 OXGR1Q96P68 337 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 OR5M11Q96RB7 305 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 NAA11Q9BSU3 229 aaPredicted RBP13.15□□□□□ -0.3
CBX3-201ENST00000337620 EMC6Q9BV81 110 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 DEFB127Q9H1M4 99 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 FANCFQ9NPI8 374 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 KLHL13Q9P2N7 655 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 NOX1Q9Y5S8 564 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 ACACAQ13085 2346 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 MGAQ8IWI9 3026 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 PRSS37A4D1T9 235 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 DCTN6O00399 190 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 MYL12BO14950 172 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 HSMCR30P0CW71 290 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 ZNF43P17038 809 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 EIF1AXP47813 144 aaKnown RBP13.14□□□□□ -0.31
CBX3-201ENST00000337620 ID4P47928 161 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 SLC25A1P53007 311 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 RAC3P60763 192 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 H3F3AP84243 136 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 RNFT1Q5M7Z0 435 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 SLC35D3Q5M8T2 416 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 SYT6Q5T7P8 510 aaPredicted RBP13.14□□□□□ -0.31
CBX3-201ENST00000337620 LCN1P1Q5VSP4 162 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 FAM109AQ8N4B1 249 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 SYT14Q8NB59 555 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 SMAP2Q8WU79 429 aaPredicted RBP13.14□□□□□ -0.31
CBX3-201ENST00000337620 ASB10Q8WXI3 467 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 DGCR14Q96DF8 476 aaKnown RBP13.14□□□□□ -0.31
CBX3-201ENST00000337620 ZHX1-C8orf76Q96EF9 292 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 UCN2Q96RP3 112 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 TBX5Q99593 518 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 MND1Q9BWT6 205 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 SRXN1Q9BYN0 137 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 NUAK2Q9H093 628 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 HAO2Q9NYQ3 351 aa13.14□□□□□ -0.31
CBX3-201ENST00000337620 EXOSC1Q9Y3B2 195 aaKnown RBP13.14□□□□□ -0.31
CBX3-201ENST00000337620 A6NIZ1 184 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 GLCEO94923 617 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 SBK2P0C263 348 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 ENPP1P22413 925 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 BIDP55957 195 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 RAP1BP61224 184 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 RAP1AP62834 184 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 SRYQ05066 204 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 TIGD6Q17RP2 521 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 RNLSQ5VYX0 342 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 OR6V1Q8N148 313 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 NANOGP1Q8N7R0 232 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 EXD3Q8N9H8 876 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 OR10H4Q8NGA5 316 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 OR2T4Q8NH00 348 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 OR2V1Q8NHB1 315 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 ALG12Q9BV10 488 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 RBM38Q9H0Z9 239 aaKnown RBP13.13□□□□□ -0.31
CBX3-201ENST00000337620 LDAHQ9H6V9 325 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 ADGRL4Q9HBW9 690 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 QPCTLQ9NXS2 382 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 DKK4Q9UBT3 224 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 RASD1Q9Y272 281 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 C12orf71A8MTZ7 269 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 CXCL13O43927 109 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 ITGB2P05107 769 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 NAA10P41227 235 aaPredicted RBP13.13□□□□□ -0.31
CBX3-201ENST00000337620 CLDN15P56746 228 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 POU4F2Q12837 409 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 ZNF239Q16600 458 aaKnown RBP13.13□□□□□ -0.31
CBX3-201ENST00000337620 BORAQ6PGQ7 559 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 LYPD4Q6UWN0 246 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 WDFY1Q8IWB7 410 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 OR10D3Q8NH80 312 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 EXO5Q9H790 373 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 MOKQ9UQ07 419 aa13.13□□□□□ -0.31
CBX3-201ENST00000337620 URB1O60287 2271 aaKnown RBP13.13□□□□□ -0.31
CBX3-201ENST00000337620 TNRC6AQ8NDV7 1962 aaKnown RBP13.12□□□□□ -0.31
CBX3-201ENST00000337620 SLC22A23A1A5C7 686 aa13.12□□□□□ -0.31
CBX3-201ENST00000337620 NPIPB13A6NJU9 1138 aa13.12□□□□□ -0.31
CBX3-201ENST00000337620 NPIPB4C9JG80 1138 aa13.12□□□□□ -0.31
CBX3-201ENST00000337620 J3QRE1 110 aa13.12□□□□□ -0.31
CBX3-201ENST00000337620 SLC16A7O60669 478 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms