RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CYGBQ8WWM9 190 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 HIST1H2ACQ93077 130 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 FOXN4Q96NZ1 517 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 TSSK2Q96PF2 358 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 MED20Q9H944 212 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 CALHM2Q9HA72 323 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 NRIP3Q9NQ35 241 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 FAM118AQ9NWS6 357 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 B3GALT5Q9Y2C3 310 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 CORINQ9Y5Q5 1042 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 FLVCR1Q9Y5Y0 555 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 TRGV8A0A0C4DH27 118 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 FAM183AA6NL82 134 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 CLUP10909 449 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 HIST1H1CP16403 213 aaKnown RBP14.66□□□□□ -0.06
SHOX-201ENST00000334060 ACVR2AP27037 513 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 NOS3P29474 1203 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 CLDN17P56750 224 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 MYBPC1Q00872 1141 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 FMODQ06828 376 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 CDSNQ15517 529 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 CREB3L2Q70SY1 520 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 PARP8Q8N3A8 854 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 LINC00471Q8N535 108 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 SCAIQ8N9R8 606 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 ST6GALNAC3Q8NDV1 305 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 SDR9C7Q8NEX9 313 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 OR4K13Q8NH42 304 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 ERMAPQ96PL5 475 aaPredicted RBP14.66□□□□□ -0.06
SHOX-201ENST00000334060 C12orf49Q9H741 205 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 RNF122Q9H9V4 155 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 INIPQ9NRY2 104 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 HIVEP3Q5T1R4 2406 aa14.66□□□□□ -0.06
SHOX-201ENST00000334060 hCG_2014768A0A024R1R8 64 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 ZAR1LA6NP61 321 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 DCTN6O00399 190 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 BCKDKO14874 412 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 GPANK1O95872 356 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 CDKN2AP42771 156 aaKnown RBP14.65□□□□□ -0.06
SHOX-201ENST00000334060 GIPRP48546 466 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 BIDP55957 195 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 RPS3AP61247 264 aaKnown RBP14.65□□□□□ -0.06
SHOX-201ENST00000334060 CDK5Q00535 292 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 CAMK2DQ13557 499 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 B3GLCTQ6Y288 498 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 SLC35D2Q76EJ3 337 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 LINGO2Q7L985 606 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 CHMP1BQ7LBR1 199 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 SYT14Q8NB59 555 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 BBS1Q8NFJ9 593 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 HDAC2Q92769 488 aaKnown RBP14.65□□□□□ -0.06
SHOX-201ENST00000334060 ZNF837Q96EG3 531 aaPredicted RBP14.65□□□□□ -0.06
SHOX-201ENST00000334060 POLDIP3Q9BY77 421 aaKnown RBP14.65□□□□□ -0.06
SHOX-201ENST00000334060 PRRG4Q9BZD6 226 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 KRCC1Q9NPI7 259 aaPredicted RBP14.65□□□□□ -0.06
SHOX-201ENST00000334060 MYRFQ9Y2G1 1151 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 MYO7BQ6PIF6 2116 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 A0A1W2PNV4 684 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 B8ZZF3 427 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 PRKYO43930 277 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 SYNGR4O95473 234 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 GLI4P10075 376 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 GSTM3P21266 225 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 ADARB1P78563 741 aaKnown RBP14.65□□□□□ -0.06
SHOX-201ENST00000334060 PMPCAQ10713 525 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 PGGHGQ32M88 737 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 ARMC4Q5T2S8 1044 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 C1orf185Q5T7R7 199 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 NSUN5P2Q63ZY6 315 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 LYPD4Q6UWN0 246 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 PM20D2Q8IYS1 436 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 NMNAT3Q96T66 252 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 TTYH2Q9BSA4 534 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 ADI1Q9BV57 179 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 C8orf4Q9NR00 106 aa14.65□□□□□ -0.06
SHOX-201ENST00000334060 MCTS1Q9ULC4 181 aaKnown RBP14.65□□□□□ -0.06
SHOX-201ENST00000334060 ARHGAP21Q5T5U3 1957 aa14.65□□□□□ -0.07
SHOX-201ENST00000334060 SLC35F4A4IF30 521 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 FAM171A2A8MVW0 826 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 OR6A2O95222 327 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 GYPBP06028 91 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 FKBP2P26885 142 aaKnown RBP14.64□□□□□ -0.07
SHOX-201ENST00000334060 COX10Q12887 443 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 ETFDHQ16134 617 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 KCTD21Q4G0X4 260 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 UEVLDQ8IX04 471 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 ZNF519Q8TB69 540 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 TEX47Q8TBZ9 253 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 ASB10Q8WXI3 467 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 OXGR1Q96P68 337 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 IL4I1Q96RQ9 567 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 TVP23BQ9NYZ1 205 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 INTS1Q8N201 2190 aaKnown RBP14.64□□□□□ -0.07
SHOX-201ENST00000334060 A0A087WXM4 84 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 TRIM64CA6NLI5 447 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 AHRRA9YTQ3 701 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 EIF1BO60739 113 aaKnown RBP14.64□□□□□ -0.07
SHOX-201ENST00000334060 CD14P08571 375 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 AGTR1P30556 359 aa14.64□□□□□ -0.07
SHOX-201ENST00000334060 ZP4Q12836 540 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms