RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 S1PR1P21453 382 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 GALP22466 123 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 ATP6V1E1P36543 226 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 GIPRP48546 466 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 ACSM1Q08AH1 577 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 C10orf120Q5SQS8 335 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 DCST1Q5T197 706 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 C11orf87Q6NUJ2 197 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 SLC25A24Q6NUK1 477 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 ARL9Q6T311 187 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HEPN1Q6WQI6 88 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 SLC36A4Q6YBV0 504 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST2H3AQ71DI3 136 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 MEX3DQ86XN8 651 aaKnown RBP10.85□□□□□ -0.67
SHMT2-201ENST00000328923 OR4E2Q8NGC2 313 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 OR9A1PQ8NGU1 263 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 LGALS14Q8TCE9 139 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 MRGPRX3Q96LB0 322 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 WDR92Q96MX6 357 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 SPON2Q9BUD6 331 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 KRCC1Q9NPI7 259 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-201ENST00000328923 PRG3Q9Y2Y8 225 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-201ENST00000328923 KIAA1671Q9BY89 1806 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 PRAMEF4O60810 478 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BKO60814 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 TBX18O95935 607 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BJP06899 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 SELPP16109 830 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BOP23527 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 S100A7P31151 101 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BBP33778 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 PCBP4P57723 403 aaKnown RBP10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BDP58876 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BCP62807 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST2H2BEQ16778 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 PNLIPRP3Q17RR3 467 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 ZXDCQ2QGD7 858 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-201ENST00000328923 PRAMEF9Q5VWM5 478 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 ZDHHC20Q5W0Z9 365 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 CLDN19Q8N6F1 224 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 OR1N1Q8NGS0 311 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 PIGXQ8TBF5 258 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 APOBEC4Q8WW27 367 aaKnown RBP10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BHQ93079 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 KIRREL1Q96J84 757 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BNQ99877 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 HIST1H2BMQ99879 126 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 TAS2R10Q9NYW0 307 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 GULP1Q9UBP9 304 aa10.85□□□□□ -0.67
SHMT2-201ENST00000328923 VWA8A3KMH1 1905 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 CDH23Q9H251 3354 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF724A8MTY0 619 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 CDRT15L2A8MXV6 281 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 SLC16A5O15375 505 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 ALOX12BO75342 701 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 RPLP1P05386 114 aaKnown RBP10.84□□□□□ -0.67
SHMT2-201ENST00000328923 METTL15P1P0C7V9 234 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 TLX1P31314 330 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-201ENST00000328923 THBS4P35443 961 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 NSG1P42857 185 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 DGKGP49619 791 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 LSM11P83369 360 aaKnown RBP eCLIP10.84□□□□□ -0.67
SHMT2-201ENST00000328923 CHIT1Q13231 466 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 GPNMBQ14956 572 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 ARMC12Q5T9G4 340 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 FBXW9Q5XUX1 488 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 CDC73Q6P1J9 531 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 CD300LDQ6UXZ3 194 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 UBE2R2Q712K3 238 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-201ENST00000328923 GLB1L2Q8IW92 636 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 OR7G2Q8NG99 324 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 OR13C3Q8NGS6 347 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 FCAMRQ8WWV6 532 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 NTNG2Q96CW9 530 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 GALNT14Q96FL9 552 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 SLC35A5Q9BS91 424 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 MRI1Q9BV20 369 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 PLA2G12AQ9BZM1 189 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 MMP24Q9Y5R2 645 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 NPFFR2Q9Y5X5 522 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 A0A0G2JN53 185 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 TP53I11O14683 189 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 REM1O75628 298 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 GZMBP10144 247 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 PPP2R1BP30154 601 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 DIO1P49895 249 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 RAE1P78406 368 aaKnown RBP10.84□□□□□ -0.67
SHMT2-201ENST00000328923 AIMP2Q13155 320 aaKnown RBP10.84□□□□□ -0.67
SHMT2-201ENST00000328923 HIST2H3PS2Q5TEC6 136 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 NCR3LG1Q68D85 454 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 CFAP52Q8N1V2 620 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 RNF175Q8N4F7 328 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF610Q8N9Z0 462 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 OR13C5Q8NGS8 318 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF671Q8TAW3 534 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 FBXO32Q969P5 355 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 COL26A1Q96A83 441 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 PIK3IP1Q96FE7 263 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms