RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 NMNAT2Q9BZQ4 307 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF696Q9H7X3 374 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 BLOC1S6Q9UL45 172 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 USP24Q9UPU5 2620 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 FAM183AA6NL82 134 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 SNTNA6NMZ2 147 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 CLCA1A8K7I4 914 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 PRODHO43272 600 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 FAM20BO75063 409 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 RENP00797 406 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 LYNP07948 512 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 CRHBPP24387 322 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 TDGF1P3P51864 188 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC25A1P53007 311 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 NUDT6P53370 316 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 GABARAPL2P60520 117 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 PON3Q15166 354 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 EEF1A1P5Q5VTE0 462 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 CREB3L2Q70SY1 520 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 FGD2Q7Z6J4 655 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 CISD2Q8N5K1 135 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 CYB561A3Q8NBI2 242 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 BBS1Q8NFJ9 593 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 ZPLD1Q8TCW7 415 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 RFKQ969G6 155 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 TXNDC15Q96J42 360 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 HCAR1Q9BXC0 346 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 MED20Q9H944 212 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 MED29Q9NX70 200 aa9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 VSX1Q9NZR4 365 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-201ENST00000327028 IGKV3D-15A0A087WSY6 115 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 PRSS37A4D1T9 235 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 MAGEA13PA6NCF6 341 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 OR6C68A6NDL8 312 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 ARHGEF9O43307 516 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 XPNPEP2O43895 674 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 SMNDC1O75940 238 aaKnown RBP eCLIP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 RPSAP08865 295 aaKnown RBP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 BIDP55957 195 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 ADGRE4PQ86SQ3 457 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 OR6X1Q8NH79 312 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 OTULINQ96BN8 352 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 SLX1AQ9BQ83 275 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 SCN3BQ9NY72 215 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 KLHL9Q9P2J3 617 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 TPRKBQ9Y3C4 175 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 PRRC2CQ9Y520 2896 aaKnown RBP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 TRIM64A6NGJ6 449 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 AKAP8O43823 692 aaKnown RBP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 AHCYL1O43865 530 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 FCGR2AP12318 317 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC2A5P22732 501 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 HTR1FP30939 366 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 CDH11P55287 796 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 CLDN17P56750 224 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF91Q05481 1191 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 RUNX1T1Q06455 604 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 RASGEF1BQ0VAM2 473 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 RNPS1Q15287 305 aaKnown RBP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 WDFY1Q8IWB7 410 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 ZIC4Q8N9L1 334 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 NOXO1Q8NFA2 376 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 OR9Q1Q8NGQ5 310 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 FNDC9Q8TBE3 224 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 ABHD3Q8WU67 409 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 PTP4A1Q93096 173 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 SNRNP40Q96DI7 357 aaKnown RBP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 KCNK17Q96T54 332 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 ALG12Q9BV10 488 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 PRRG4Q9BZD6 226 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 CLCF1Q9UBD9 225 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 PSORS1C1Q9UIG5 152 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 ING1Q9UK53 422 aaPredicted RBP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 RCE1Q9Y256 329 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 RPL36Q9Y3U8 105 aaKnown RBP9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 FLVCR1Q9Y5Y0 555 aa9.12□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC22A23A1A5C7 686 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 CCDC182A6NF36 153 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC22A20A6NK97 555 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 CENPBD1B2RD01 187 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 H7C1C5 153 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 TRMUO75648 421 aaKnown RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 IGHG1P01857 330 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 DBTP11182 482 aaKnown RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 PIPP12273 146 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 PTGS2P35354 604 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC15A1P46059 708 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 LCN6P62502 163 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 LGALS3BPQ08380 585 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 TMED1Q13445 227 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 APOFQ13790 326 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 MEPCEQ7L2J0 689 aaKnown RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 IPCEF1Q8WWN9 437 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 TMEM45BQ96B21 275 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 WBP1Q96G27 269 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF385AQ96PM9 386 aaKnown RBP9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 EMC6Q9BV81 110 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 RNF122Q9H9V4 155 aa9.11□□□□□ -0.95
VIPAS39-201ENST00000327028 RPRD1BQ9NQG5 326 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms