RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 HSF1Q00613 529 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 MVKQ03426 396 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 RAB40BQ12829 278 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 KRR1Q13601 381 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 POU4F3Q15319 338 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 MS4A18Q3C1V0 323 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 PLBD1Q6P4A8 553 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 MEPCEQ7L2J0 689 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 CHMP1BQ7LBR1 199 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 SLC37A3Q8NCC5 494 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 GALNT11Q8NCW6 608 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 OR4K13Q8NH42 304 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 OTULINQ96BN8 352 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 ADAD1Q96M93 576 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 ZNF346Q9UL40 294 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 MOKQ9UQ07 419 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 GPR52Q9Y2T5 361 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 ADAM18Q9Y3Q7 739 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 FREM3P0C091 2139 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 SHANK1Q9Y566 2161 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 TEX13CA0A0J9YWL9 993 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 TRIM64CA6NLI5 447 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 CENPBD1B2RD01 187 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 M0R129 80 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 TNFSF11O14788 317 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 FADS2O95864 444 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 IGHG3P01860 377 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 DBTP11182 482 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 GNLYP22749 145 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 RFC3P40938 356 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 ZNF91Q05481 1191 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 APOFQ13790 326 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 CRMP1Q14194 572 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 ACKR1Q16570 336 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 SMN1Q16637 294 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 PLEKHN1Q494U1 663 aaPredicted RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 GXYLT1Q4G148 440 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 GGNQ86UU5 652 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 TMEM99Q8N816 258 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 OR2T4Q8NH00 348 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 GGHQ92820 318 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 Q96M85 177 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 CCDC90BQ9GZT6 254 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 HINT3Q9NQE9 182 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 FKBP14Q9NWM8 211 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 CHCHD3Q9NX63 227 aaKnown RBP16.13■□□□□ 0.17
SYNE4-201ENST00000324444 HAO2Q9NYQ3 351 aa16.13■□□□□ 0.17
SYNE4-201ENST00000324444 MPDZO75970 2070 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 CLEC18AA5D8T8 446 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 SYNGR4O95473 234 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 CDK1P06493 297 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 ZNF708P17019 499 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 DCKP27707 260 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 SHC1P29353 583 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 ATP6V1E1P36543 226 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 ACVR1BP36896 505 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 SLC15A1P46059 708 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 RPL5P46777 297 aaKnown RBP16.12■□□□□ 0.17
SYNE4-201ENST00000324444 SRSF1Q07955 248 aaKnown RBP eCLIP16.12■□□□□ 0.17
SYNE4-201ENST00000324444 PON3Q15166 354 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 ZNF362Q5T0B9 420 aaPredicted RBP16.12■□□□□ 0.17
SYNE4-201ENST00000324444 VASNQ6EMK4 673 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 NIPAL3Q6P499 406 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 LEG1Q6P5S2 330 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 DNM1P34Q6PK57 102 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 CLEC18BQ6UXF7 455 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 AHSA2Q719I0 299 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 SLC35D2Q76EJ3 337 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 CLEC18CQ8NCF0 446 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 NPEPL1Q8NDH3 523 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 FCGR1BQ92637 280 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 TMEM80Q96HE8 168 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 ADGRG7Q96K78 797 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 TSPAN32Q96QS1 320 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 AASSQ9UDR5 926 aa16.12■□□□□ 0.17
SYNE4-201ENST00000324444 SPTAN1Q13813 2472 aaKnown RBP16.11■□□□□ 0.17
SYNE4-201ENST00000324444 SLC2A10O95528 541 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 OPN1LWP04000 364 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 CPN1P15169 458 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 ATP6V1B1P15313 513 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 CRABP1P29762 137 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 TTKP33981 857 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 EIF1AXP47813 144 aaKnown RBP16.11■□□□□ 0.17
SYNE4-201ENST00000324444 LHX2P50458 406 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 NUDT6P53370 316 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 CLDN20P56880 219 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 RPS7P62081 194 aaKnown RBP16.11■□□□□ 0.17
SYNE4-201ENST00000324444 POU3F1Q03052 451 aaPredicted RBP16.11■□□□□ 0.17
SYNE4-201ENST00000324444 ST3GAL4Q11206 333 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 RNLSQ5VYX0 342 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 PM20D2Q8IYS1 436 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 SDR9C7Q8NEX9 313 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 OR10D3Q8NH80 312 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 ZNF519Q8TB69 540 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 DNAJA3Q96EY1 480 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 NMNAT3Q96T66 252 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 SLC6A15Q9H2J7 730 aa16.11■□□□□ 0.17
SYNE4-201ENST00000324444 MCTS1Q9ULC4 181 aaKnown RBP16.11■□□□□ 0.17
SYNE4-201ENST00000324444 USP9YO00507 2555 aaPredicted RBP16.11■□□□□ 0.17
SYNE4-201ENST00000324444 ESPL1Q14674 2120 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms