RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CDK5R1Q15078 307 aa15.31■□□□□ 0.04
PACS1-201ENST00000320580 EXOSC6Q5RKV6 272 aaKnown RBP15.31■□□□□ 0.04
PACS1-201ENST00000320580 SLC30A7Q8NEW0 376 aa15.31■□□□□ 0.04
PACS1-201ENST00000320580 TLNRD1Q9H1K6 362 aa15.31■□□□□ 0.04
PACS1-201ENST00000320580 FAM212BQ9NTI7 297 aaPredicted RBP15.31■□□□□ 0.04
PACS1-201ENST00000320580 ING1Q9UK53 422 aaPredicted RBP15.31■□□□□ 0.04
PACS1-201ENST00000320580 MRPS33Q9Y291 106 aaKnown RBP15.31■□□□□ 0.04
PACS1-201ENST00000320580 TBC1D3EA0A087X179 549 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 TRAV1-2A0A0B4J238 106 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 H7C417 338 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 ACAA1P09110 424 aaPredicted RBP15.3■□□□□ 0.04
PACS1-201ENST00000320580 RPS2P15880 293 aaKnown RBP15.3■□□□□ 0.04
PACS1-201ENST00000320580 TAGLN2P37802 199 aaKnown RBP15.3■□□□□ 0.04
PACS1-201ENST00000320580 CYB5R2Q6BCY4 276 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 PARGQ86W56 976 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 SMIM19Q96E16 107 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 ZNF514Q96K75 400 aaPredicted RBP15.3■□□□□ 0.04
PACS1-201ENST00000320580 FAM83CQ9BQN1 747 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 PDFQ9HBH1 243 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 C2orf42Q9NWW7 574 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 TRBV23OR9-2A0A075B6M9 112 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 NME2P1O60361 137 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 FUT1P19526 365 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 S1PR1P21453 382 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 LMAN2Q12907 356 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 C4orf17Q53FE4 359 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 USP53Q70EK8 1073 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 MRPL41Q8IXM3 137 aaKnown RBP15.3■□□□□ 0.04
PACS1-201ENST00000320580 PLPP6Q8IY26 295 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 LINC01465Q8N7H1 131 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 PPP1R14AQ96A00 147 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 POM121Q96HA1 1249 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 CLCC1Q96S66 551 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 C8orf33Q9H7E9 229 aaPredicted RBP15.3■□□□□ 0.04
PACS1-201ENST00000320580 TUBG2Q9NRH3 451 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 FITM1A5D6W6 292 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 GCM2O75603 506 aaPredicted RBP15.3■□□□□ 0.04
PACS1-201ENST00000320580 ARG1P05089 322 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 SLC35G6P0C7Q6 338 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 AMY2BP19961 511 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 AVPR2P30518 371 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 PCBP3P57721 371 aaKnown RBP15.3■□□□□ 0.04
PACS1-201ENST00000320580 OR1Q1Q15612 314 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 ALG11Q2TAA5 492 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 ITPRIPL2Q3MIP1 535 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 DCAF12L2Q5VW00 463 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 IL34Q6ZMJ4 242 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 CDS1Q92903 461 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 SELENOIQ9C0D9 397 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 GLIPR2Q9H4G4 154 aa15.3■□□□□ 0.04
PACS1-201ENST00000320580 K7EPK0 472 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PRKRAO75569 313 aaKnown RBP15.29■□□□□ 0.04
PACS1-201ENST00000320580 KAT7O95251 611 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 NFATC1O95644 943 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PMP2P02689 132 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 TAS2R31P59538 309 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 RNF4P78317 190 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 MAMSTRQ6ZN01 415 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 FAM71E2Q8N5Q1 922 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 OR10G6Q8NH81 332 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PHYHIPLQ96FC7 376 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 HHIPQ96QV1 700 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 FZD3Q9NPG1 666 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 EPHA6Q9UF33 1036 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 KCNE1BA0A087WTH5 132 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 ST8SIA5O15466 376 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 CALCBP10092 127 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 GABRA3P34903 492 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 CASRP41180 1078 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 SKP2Q13309 424 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 ZNF705AQ6ZN79 300 aaPredicted RBP15.29■□□□□ 0.04
PACS1-201ENST00000320580 GALNT16Q8N428 558 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PHYHIPQ92561 330 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 NCDNQ9UBB6 729 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 WASF3Q9UPY6 502 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PCDHGA5Q9Y5G8 931 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PHIPQ8WWQ0 1821 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 C17orf113A0A1B0GUU1 675 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PAX6P26367 422 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 VEGFBP49765 207 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 ENPP2Q13822 863 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 TRAM1L1Q8N609 369 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 TM4SF18Q96CE8 201 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 KIRREL1Q96J84 757 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 MYADMQ96S97 322 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PLEKHA1Q9HB21 404 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 A0A1W2PS29 197 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PLPP2O43688 288 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 EIF1BO60739 113 aaKnown RBP15.29■□□□□ 0.04
PACS1-201ENST00000320580 FABP4P15090 132 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 CMPK1P30085 196 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 EIF1P41567 113 aaKnown RBP15.29■□□□□ 0.04
PACS1-201ENST00000320580 RAE1P78406 368 aaKnown RBP15.29■□□□□ 0.04
PACS1-201ENST00000320580 MAT1AQ00266 395 aaKnown RBP15.29■□□□□ 0.04
PACS1-201ENST00000320580 MORN1Q5T089 497 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 RNF165Q6ZSG1 346 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 PFN4Q8NHR9 129 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 ZNF587Q96SQ5 575 aaPredicted RBP15.29■□□□□ 0.04
PACS1-201ENST00000320580 SEC11CQ9BY50 192 aa15.29■□□□□ 0.04
PACS1-201ENST00000320580 ESRP2Q9H6T0 727 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms