RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 RAB26Q9ULW5 256 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 RASD1Q9Y272 281 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 FAM215AQ9Y5M1 114 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 FLVCR1Q9Y5Y0 555 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 KMT2BQ9UMN6 2715 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 SHANK1Q9Y566 2161 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 ADGRG4Q8IZF6 3080 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 H0YJX3 145 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 SLC16A6O15403 523 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 EDN3P14138 238 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 ACVR2AP27037 513 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 PCYT1AP49585 367 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 KLHL12Q53G59 568 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 C12orf73Q69YU5 71 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 KRT80Q6KB66 452 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 GPX7Q96SL4 187 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 OR51V1Q9H2C8 321 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 TXNIPQ9H3M7 391 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 SLC25A19Q9HC21 320 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF226Q9NYT6 803 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 KLHL9Q9P2J3 617 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 NOX1Q9Y5S8 564 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 CHD6Q8TD26 2715 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 RIIAD1A6NNX1 92 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 H0YAE9 185 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 DNPH1O43598 174 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 GPANK1O95872 356 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 FMO3P31513 532 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 DAP3P51398 398 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 FOXF2Q12947 444 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 KEAP1Q14145 624 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 SEM1Q6ZVN7 128 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 ZIC4Q8N9L1 334 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 SLC37A3Q8NCC5 494 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 ASB10Q8WXI3 467 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 HDAC2Q92769 488 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 LRR1Q96L50 414 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 ALKBH3Q96Q83 286 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 PITX2Q99697 317 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 APOL4Q9BPW4 351 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 TEX12Q9BXU0 123 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 NDEL1Q9GZM8 345 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 OSGIN2Q9Y236 505 aa13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 NOSIPQ9Y314 301 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-202ENST00000318007 OR6C68A6NDL8 312 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 EIF4E1BA6NMX2 242 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF726A6NNF4 738 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 PYCARD-AS1I3L0S3 204 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 M0R3G1 203 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 APOL3O95236 402 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF3P17036 446 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 CENPAP49450 140 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 TLE1Q04724 770 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ZP4Q12836 540 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ANKDD1AQ495B1 522 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF362Q5T0B9 420 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 C9orf135Q5VTT2 229 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 LYPD4Q6UWN0 246 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 NUFIP2Q7Z417 695 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 MED12LQ86YW9 2145 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 CPOQ8IVL8 374 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ARIH2OSQ8N7S6 290 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 NAXEQ8NCW5 288 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ADPRHL1Q8NDY3 354 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 NSMAFQ92636 917 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 WBP1Q96G27 269 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 RHNO1Q9BSD3 238 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ANKRD60Q9BZ19 345 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 RNF122Q9H9V4 155 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 SRA1Q9HD15 236 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 HINT3Q9NQE9 182 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 UBAP1Q9NZ09 502 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 AHRRA9YTQ3 701 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 DCTN6O00399 190 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 TOXO94900 526 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 VAMP5O95183 116 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 STSP08842 583 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 UQCRFS1P47985 274 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 CLRN1P58418 232 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 RPS7P62081 194 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 RBPJQ06330 500 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ETFDHQ16134 617 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ARMC4Q5T2S8 1044 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 C1orf185Q5T7R7 199 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 B3GNT6Q6ZMB0 384 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ADGRE4PQ86SQ3 457 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF519Q8TB69 540 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 APH1BQ8WW43 257 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 CMC2Q9NRP2 79 aa13.67□□□□□ -0.22
PDLIM5-202ENST00000318007 IGKV1D-43A0A0B4J1Z2 117 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 FZD7O75084 574 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 TRMUO75648 421 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 SEC14L2O76054 403 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 GRK5P34947 590 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 ISL1P61371 349 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 PMPCAQ10713 525 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 ITGADQ13349 1161 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 MED21Q13503 144 aa13.66□□□□□ -0.22
PDLIM5-202ENST00000318007 EIF2S3LQ2VIR3 472 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms