RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PLSCR5A0PG75 271 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 LGALS8O00214 317 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 GDF9O60383 454 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 EIF1BO60739 113 aaKnown RBP11.89□□□□□ -0.51
CPNE1-201ENST00000317677 FMO6PO60774 539 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 SOX30O94993 753 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 FUT1P19526 365 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 EIF1P41567 113 aaKnown RBP11.89□□□□□ -0.51
CPNE1-201ENST00000317677 GIPRP48546 466 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 BIKQ13323 160 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 LIPKQ5VXJ0 399 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 PWWP2BQ6NUJ5 590 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 SHISA6Q6ZSJ9 500 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 NLRC3Q7RTR2 1065 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 MRGPREQ86SM8 312 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 SLITRK4Q8IW52 837 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 CMIPQ8IY22 773 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 TCEANCQ8N8B7 351 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 PFN4Q8NHR9 129 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 PIGXQ8TBF5 258 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 ACOT12Q8WYK0 555 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 ADIPOR1Q96A54 375 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 MRPS24Q96EL2 167 aaKnown RBP11.89□□□□□ -0.51
CPNE1-201ENST00000317677 ACTR6Q9GZN1 396 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 APMAPQ9HDC9 416 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 C20orf141Q9NUB4 165 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 DNAJC27Q9NZQ0 273 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 TESQ9UGI8 421 aaKnown RBP11.89□□□□□ -0.51
CPNE1-201ENST00000317677 DMXL1Q9Y485 3027 aa11.89□□□□□ -0.51
CPNE1-201ENST00000317677 FAM74A7A6NL05 159 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 TCRBP04435 133 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 MAKP20794 623 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 GSTM3P21266 225 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 AHCYP23526 432 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 FPR3P25089 353 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 FXYD6P3P58550 94 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 ELAVL1Q15717 326 aaKnown RBP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 FAM74A3Q4VXF1 159 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF385CQ66K41 422 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 TCEAL6Q6IPX3 200 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 C5orf46Q6UWT4 87 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 RABEPKQ7Z6M1 372 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 JAZF1Q86VZ6 243 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 C9orf40Q8IXQ3 194 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 OR4Q3Q8NH05 313 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 MOSPD2Q8NHP6 518 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 TCEAL3Q969E4 200 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 ABCG5Q9H222 651 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 OCIAD1Q9NX40 245 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 TVP23BQ9NYZ1 205 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 PRODH2Q9UF12 536 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 PPIEQ9UNP9 301 aaKnown RBP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 OR10H1Q9Y4A9 318 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 IGLV3-12A0A075B6K2 115 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 A0A0B4J2E0 115 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 A0A1B0GX12 115 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 OIP5O43482 229 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 PPICP45877 212 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 ACY1Q03154 408 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 NSDHLQ15738 373 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 NTRK2Q16620 822 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 GSG1Q2KHT4 349 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 FNDC7Q5VTL7 733 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 LCN10Q6JVE6 187 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 APOOLQ6UXV4 268 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 PLPP5Q8NEB5 264 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 DMBX1Q8NFW5 382 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 OR2T35Q8NGX2 323 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 NAT6Q93015 286 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 RFT1Q96AA3 541 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 OTULINQ96BN8 352 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 LCORQ96JN0 433 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 SLC46A1Q96NT5 459 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 THAP7Q9BT49 309 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 POLDIP3Q9BY77 421 aaKnown RBP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 NRSN2Q9GZP1 204 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 HDHD2Q9H0R4 259 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 MKKSQ9NPJ1 570 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 MEPEQ9NQ76 525 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-201ENST00000317677 NUDT15Q9NV35 164 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 FBXL2Q9UKC9 423 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 MKL2Q9ULH7 1088 aa11.88□□□□□ -0.51
CPNE1-201ENST00000317677 A0A1B0GWA3 101 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 TRDV1A0A1B0GX56 115 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 TRABD2BA6NFA1 517 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 CER1O95813 267 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 APOC3P02656 99 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 HRGP04196 525 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 S100A8P05109 93 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 NGFRP08138 427 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 ZGLP1P0C6A0 271 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 CTBP2P56545 445 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 EBPQ15125 230 aaKnown RBP11.87□□□□□ -0.51
CPNE1-201ENST00000317677 OCLNQ16625 522 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 KLHL26Q53HC5 615 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 METTL11BQ5VVY1 283 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF620Q6ZNG0 422 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 TMEM91Q6ZNR0 172 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms