RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TTC23LQ6PF05 361 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 DPY19L2P2Q6ZN68 376 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 FRRS1Q6ZNA5 592 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 CLDN19Q8N6F1 224 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ZNRF1Q8ND25 227 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OR4F17Q8NGA8 305 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OR52B6Q8NGF0 335 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ITFG1Q8TB96 612 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 MRGPRDQ8TDS7 321 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TWIST2Q8WVJ9 160 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 THRSPQ92748 146 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 SMARCD2Q92925 531 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 C19orf60Q96EN9 201 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OR4F4Q96R69 305 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 MTHFD2LQ9H903 347 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 NRN1Q9NPD7 142 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 B3GAT2Q9NPZ5 323 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 SCRT2Q9NQ03 307 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ELOVL2Q9NXB9 296 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF580Q9UK33 172 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PRPF19Q9UMS4 504 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 L3MBTL1Q9Y468 752 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OARD1Q9Y530 152 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 LRP12Q9Y561 859 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 DNAJC15Q9Y5T4 150 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 RNF215Q9Y6U7 377 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 DNAH12Q6ZR08 3092 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ANKRD36A6QL64 1941 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 IGHV3-38A0A0C4DH36 116 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 A0A1B0GWJ7 208 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TSPAN11A1L157 253 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PSMD11O00231 422 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ARPC1BO15143 372 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 E2F6O75461 281 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 STK17BO94768 372 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 STAMBPO95630 424 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OTCP00480 354 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 IGHG3P01860 377 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 C8GP07360 202 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 RPS17P08708 135 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ANXA5P08758 320 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 LINC00032P0C843 101 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ATP1B2P14415 290 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 IDO1P14902 403 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 RPS2P15880 293 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF26P17031 533 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 GCKP35557 465 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 SOX6P35712 828 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ZFP36L2P47974 494 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ACADVLP49748 655 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 NUDT2P50583 147 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 CCNG1P51959 295 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 SEMG2Q02383 582 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 FASTKQ14296 549 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 SHHQ15465 462 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TRIP10Q15642 601 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 MAJINQ3KP22 176 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ACSBG2Q5FVE4 666 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 FAM78AQ5JUQ0 283 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 WLSQ5T9L3 541 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TMEM215Q68D42 235 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 C18orf65Q6ZTR6 163 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 GPRIN3Q6ZVF9 776 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 RPS27LQ71UM5 84 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PGAM4Q8N0Y7 254 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TCAIMQ8N3R3 496 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TRAM1L1Q8N609 369 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 VN1R2Q8NFZ6 395 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OR1K1Q8NGR3 316 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OR6F1Q8NGZ6 308 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OR2T6Q8NHC8 308 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 WDR36Q8NI36 951 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 MCOLN3Q8TDD5 553 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 SKA2Q8WVK7 121 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ASZ1Q8WWH4 475 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OR8D1Q8WZ84 308 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 FGF13Q92913 245 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TUBGCP3Q96CW5 907 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF382Q96SR6 550 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ZSCAN5AQ9BUG6 496 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF385DQ9H6B1 395 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 WDR41Q9HAD4 459 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 RDH14Q9HBH5 336 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ZFP14Q9HCL3 533 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 FGF22Q9HCT0 170 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 DYRK4Q9NR20 520 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 STARD5Q9NSY2 213 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 SMOXQ9NWM0 555 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 CCDC167Q9P0B6 97 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 STX18Q9P2W9 335 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 THAP10Q9P2Z0 257 aaPredicted RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 OPTCQ9UBM4 332 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 SLC7A8Q9UHI5 535 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PTBP2Q9UKA9 531 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PCTPQ9UKL6 214 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 ANGPTL2Q9UKU9 493 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 NDUFAF1Q9Y375 327 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 WIPI2Q9Y4P8 454 aa3.35□□□□□ -1.87
SMCO3-201ENST00000316048 PRSS21Q9Y6M0 314 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms