RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 CASP12Q6UXS9 341 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 P4HA3Q7Z4N8 544 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 TUSC5Q8IXB3 177 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 OR4K13Q8NH42 304 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 TP63Q9H3D4 680 aaPredicted RBP16.62■□□□□ 0.25
CDK4-202ENST00000312990 GPR52Q9Y2T5 361 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 LRRC42Q9Y546 428 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 SLC35F4A4IF30 521 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 MBD3L4A6NDZ8 208 aaPredicted RBP16.62■□□□□ 0.25
CDK4-202ENST00000312990 MBD3L3A6NE82 208 aaPredicted RBP16.62■□□□□ 0.25
CDK4-202ENST00000312990 MBD3L5A6NJ08 208 aaPredicted RBP16.62■□□□□ 0.25
CDK4-202ENST00000312990 ZNF432O94892 652 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 PRB1P04280 392 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 HMGN1P05114 100 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 ACVR1BP36896 505 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 CDKN2AP42771 156 aaKnown RBP16.62■□□□□ 0.25
CDK4-202ENST00000312990 PCYT1AP49585 367 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 IL18R1Q13478 541 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 SF3B4Q15427 424 aaKnown RBP eCLIP16.62■□□□□ 0.25
CDK4-202ENST00000312990 SNAPC1Q16533 368 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 ENTHD1Q8IYW4 607 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 SDR9C7Q8NEX9 313 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 OR52E2Q8NGJ4 325 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 MBD3L2Q8NHZ7 208 aaPredicted RBP16.62■□□□□ 0.25
CDK4-202ENST00000312990 SLC38A2Q96QD8 506 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 ZNF226Q9NYT6 803 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 AASSQ9UDR5 926 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 RNF6Q9Y252 685 aa16.62■□□□□ 0.25
CDK4-202ENST00000312990 ZNF462Q96JM2 2506 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 ZNF724A8MTY0 619 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 H7C1C5 153 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 TOXO94900 526 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 HOXD4P09016 255 aaPredicted RBP16.61■□□□□ 0.25
CDK4-202ENST00000312990 GABRB1P18505 474 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 ISL1P61371 349 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 LCN6P62502 163 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.61■□□□□ 0.25
CDK4-202ENST00000312990 DBPQ10586 325 aaPredicted RBP16.61■□□□□ 0.25
CDK4-202ENST00000312990 GUSBP1Q15486 140 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 GTF2IRD2BQ6EKJ0 949 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 GTF2IRD2Q86UP8 949 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 GCNT2Q8N0V5 402 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 TCEANCQ8N8B7 351 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 NPEPL1Q8NDH3 523 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 OR6X1Q8NH79 312 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 HDAC2Q92769 488 aaKnown RBP16.61■□□□□ 0.25
CDK4-202ENST00000312990 IL4I1Q96RQ9 567 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 NMNAT3Q96T66 252 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 DDOQ99489 341 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 APOL4Q9BPW4 351 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 TEX12Q9BXU0 123 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 PRRG3Q9BZD7 231 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 IMPAD1Q9NX62 359 aa16.61■□□□□ 0.25
CDK4-202ENST00000312990 GPR171O14626 319 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 ARHGEF9O43307 516 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 DENRO43583 198 aaKnown RBP16.6■□□□□ 0.25
CDK4-202ENST00000312990 YES1P07947 543 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 MYF6P23409 242 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 AGTR1P30556 359 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 SELENOPP49908 381 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 CAMK2DQ13557 499 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 CRMP1Q14194 572 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 B3GNT6Q6ZMB0 384 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 MCEMP1Q8IX19 187 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 C8orf59Q8N0T1 100 aaPredicted RBP16.6■□□□□ 0.25
CDK4-202ENST00000312990 CYB561A3Q8NBI2 242 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 SLC37A3Q8NCC5 494 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 TMEM45BQ96B21 275 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 GMPPAQ96IJ6 420 aaPredicted RBP16.6■□□□□ 0.25
CDK4-202ENST00000312990 OR2M2Q96R28 347 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 KCNK17Q96T54 332 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 MRPL13Q9BYD1 178 aaKnown RBP16.6■□□□□ 0.25
CDK4-202ENST00000312990 GP6Q9HCN6 339 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 RASSF1Q9NS23 344 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 EMC3Q9P0I2 261 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 SH3BGRL2Q9UJC5 107 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 KLHL21Q9UJP4 597 aa16.6■□□□□ 0.25
CDK4-202ENST00000312990 OR6C68A6NDL8 312 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 RIIAD1A6NNX1 92 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 TLX2O43763 284 aaPredicted RBP16.59■□□□□ 0.25
CDK4-202ENST00000312990 SS18L1O75177 396 aaPredicted RBP16.59■□□□□ 0.25
CDK4-202ENST00000312990 TRMUO75648 421 aaKnown RBP16.59■□□□□ 0.25
CDK4-202ENST00000312990 PGA4P0DJD7 388 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 PGA3P0DJD8 388 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 EDNRAP25101 427 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 FAM205BPQ63HN1 556 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 LEG1Q6P5S2 330 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 ADCK1Q86TW2 530 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 TMEM123Q8N131 208 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 DEPDC4Q8N2C3 294 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 SETD9Q8NE22 299 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 OR8J1Q8NGP2 316 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 SLC25A44Q96H78 314 aaPredicted RBP16.59■□□□□ 0.25
CDK4-202ENST00000312990 PLEKHA8Q96JA3 519 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 CNBD2Q96M20 576 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 ADAD1Q96M93 576 aaKnown RBP16.59■□□□□ 0.25
CDK4-202ENST00000312990 TM9SF2Q99805 663 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 HCAR1Q9BXC0 346 aa16.59■□□□□ 0.25
CDK4-202ENST00000312990 HINT3Q9NQE9 182 aaKnown RBP16.59■□□□□ 0.25
CDK4-202ENST00000312990 RCE1Q9Y256 329 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 465.2 ms