RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 A0A096LNT2 108 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 PIP5K1CO60331 668 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 KRT33AO76009 404 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 WNT11O96014 354 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 ADORA3P0DMS8 318 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 THRBP10828 461 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 NAAAQ02083 359 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 HGFACQ04756 655 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 RUNX1T1Q06455 604 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 FXNQ16595 210 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 ZNF544Q6NX49 715 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 CBLL1Q75N03 491 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 GPR137CQ8N3F9 429 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 C10orf53Q8N6V4 93 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 OR6X1Q8NH79 312 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 TMEM239Q8WW34 195 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 PRRC1Q96M27 445 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 HOPXQ9BPY8 73 aaPredicted RBP12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 KATNB1Q9BVA0 655 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 ALG2Q9H553 416 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 NANSQ9NR45 359 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 CBLN4Q9NTU7 201 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 NAV3Q8IVL0 2385 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 PLCE1Q9P212 2302 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 FN1P02751 2386 aaKnown RBP12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 C11orf98E9PRG8 122 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 J3KTA2 159 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 CXCR6O00574 342 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 AKAP8O43823 692 aaKnown RBP12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 SERPINI2O75830 405 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 OR7A10O76100 309 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 LY6G6DO95868 133 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 PGA4P0DJD7 388 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 PGA3P0DJD8 388 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 CBR1P16152 277 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 FUT1P19526 365 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 AHCYP23526 432 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 PRDX6P30041 224 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 ACVR1BP36896 505 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 NUDT2P50583 147 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 BIDP55957 195 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 TAS2R41P59536 307 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 TNK1Q13470 666 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 MELKQ14680 651 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 HIST3H3Q16695 136 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 SWI5Q1ZZU3 235 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 LRFN4Q6PJG9 635 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 SLC35D2Q76EJ3 337 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 MUC15Q8N387 334 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 RBM15BQ8NDT2 890 aaKnown RBP12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 NMD3Q96D46 503 aaKnown RBP12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 CACNG6Q9BXT2 260 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 MRPL13Q9BYD1 178 aaKnown RBP12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 AP3M1Q9Y2T2 418 aa12.68□□□□□ -0.38
PPP1CA-201ENST00000312989 H7C417 338 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 IFNA14P01570 189 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 HEXAP06865 529 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 ZNF133P52736 654 aaPredicted RBP12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 PSME3P61289 254 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 IL1RL1Q01638 556 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 RPL18Q07020 188 aaKnown RBP12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 CLEC12BQ2HXU8 276 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 IQCCQ4KMZ1 466 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 AGAP6Q5VW22 663 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 KLHL24Q6TFL4 600 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 Q71RC1 249 aaPredicted RBP12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 PIGWQ7Z7B1 504 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 MDP1Q86V88 176 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 OFCC1Q8IZS5 231 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 LRRC75AQ8NAA5 344 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 MOSPD2Q8NHP6 518 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 FGFBP3Q8TAT2 258 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 GTPBP3Q969Y2 492 aaKnown RBP12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 TPD52L3Q96J77 140 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 BDH2Q9BUT1 245 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 EFCAB1Q9HAE3 211 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 FAIMQ9NVQ4 179 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 GLTPQ9NZD2 209 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
PPP1CA-201ENST00000312989 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 HLA-HP01893 362 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 IGFBP1P08833 259 aaPredicted RBP12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 B4GALT1P15291 398 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 NCK1P16333 377 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 ZNF14P17017 642 aaPredicted RBP12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 PAX7P23759 505 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 AQP2P41181 271 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 YAP1P46937 504 aaKnown RBP12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 FABP6P51161 128 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 UBE2NP61088 152 aaKnown RBP12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 ETFDHQ16134 617 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 MSMPQ1L6U9 139 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 ARMC4Q5T2S8 1044 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 ZNF584Q8IVC4 421 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 FAM86B1Q8N7N1 296 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 ASB10Q8WXI3 467 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 HTRA1Q92743 480 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 SGTBQ96EQ0 304 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 HSH2DQ96JZ2 352 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 ADAD1Q96M93 576 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms