RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CLMPQ9H6B4 373 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 GMPR2Q9P2T1 348 aaKnown RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 NPIPA5A0A0B4J1W7 369 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 CDC14CA4D256 554 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 LRP5LA4QPB2 252 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 KLKB1P03952 638 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 P04436 131 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 JUNBP17275 347 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 MTNR1BP49286 362 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 TRA2AQ13595 282 aaKnown RBP eCLIP7.57□□□□□ -1.2
VPS41-202ENST00000310301 TESK1Q15569 626 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 PDLIM3Q53GG5 364 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 ENTPD8Q5MY95 495 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ETFRF1Q6IPR1 90 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 RPL22L1Q6P5R6 122 aaKnown RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 KCNRGQ8N5I3 272 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 IL1F10Q8WWZ1 152 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ACPTQ9BZG2 426 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 LRIT2A6NDA9 550 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ACOD1A6NK06 481 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 FTCDNL1E5RQL4 147 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 PPP6CO00743 305 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 YY2O15391 372 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 MT-CO3P00414 261 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 SP9P0CG40 484 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 CLINT1Q14677 625 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ZNF100Q8IYN0 542 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 OR13C9Q8NGT0 318 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 FOXN4Q96NZ1 517 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 DDOQ99489 341 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 FKRPQ9H9S5 495 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 HHLA2Q9UM44 414 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 TRBV4-1A0A0J9YWV2 114 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 SEC14L5O43304 696 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 NSA2O95478 260 aaKnown RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 COL9A1P20849 921 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 LIPAP38571 399 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 OR2B8PP59922 312 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 GLO1Q04760 184 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 PKDCCQ504Y2 493 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ACTBL2Q562R1 376 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 STPG1Q5TH74 334 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 SLX4IPQ5VYV7 408 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 DVL3Q92997 716 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 MED20Q9H944 212 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 NRIP3Q9NQ35 241 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 SPHK1Q9NYA1 384 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 PLXNB2O15031 1838 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 PRAMEF27A3QJZ7 478 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 B4DXG7 233 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 C17orf112F2Z3M2 114 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 MPPED1O15442 326 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 TGOLN2O43493 480 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 EDIL3O43854 480 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 RAF1P04049 648 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 DBHP09172 617 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 CD46P15529 392 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ANXA7P20073 488 aaKnown RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 SLC1A3P43003 542 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 THBS3P49746 956 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 EFNA3P52797 238 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 BTG1P62324 171 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 VAMP3Q15836 100 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ATPAF1Q5TC12 328 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 PRAMEF9Q5VWM5 478 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 DBX2Q6ZNG2 339 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 NDUFAF7Q7L592 441 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 FAM160A2Q8N612 972 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 ZFYVE21Q9BQ24 234 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 RBM24Q9BX46 236 aaKnown RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 HOXD1Q9GZZ0 328 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 POFUT1Q9H488 388 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 WIF1Q9Y5W5 379 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 A6NIZ1 184 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 LGALS8O00214 317 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 HLA-HP01893 362 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 RAP1BP61224 184 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 HNF4GQ14541 408 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ZNF239Q16600 458 aaKnown RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 RNF212Q495C1 297 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 SHEQ5VZ18 495 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 C6orf15Q6UXA7 325 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 SSX7Q7RTT5 188 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 ABHD12BQ7Z5M8 362 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 LRRC56Q8IYG6 542 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 OR5M8Q8NGP6 311 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 GCDHQ92947 438 aaPredicted RBP7.57□□□□□ -1.2
VPS41-202ENST00000310301 TCTN2Q96GX1 697 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 PEX11GQ96HA9 241 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 GUCD1Q96NT3 240 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 GPR78Q96P69 363 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 PLA2G2FQ9BZM2 168 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 TAF9BQ9HBM6 251 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 HIF1ANQ9NWT6 349 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 CEP290O15078 2479 aa7.57□□□□□ -1.2
VPS41-202ENST00000310301 OR2A25A4D2G3 310 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 TRABD2BA6NFA1 517 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 FAM227AF5H4B4 570 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 M0QYG6 137 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms