RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SIRPAP78324 504 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 PUDPQ08623 228 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 EIF3IQ13347 325 aaKnown RBP19.14■□□□□ 0.65
ATG4D-201ENST00000309469 OXA1LQ15070 435 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 DHRS13Q6UX07 377 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 KDM8Q8N371 416 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 TMEM156Q8N614 296 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 ABHD4Q8TB40 342 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 PGLYRP3Q96LB9 341 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 ANGPTL4Q9BY76 406 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 TVP23AA6NH52 213 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 LIPT2A6NK58 231 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 DVL2O14641 736 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 RGS5O15539 181 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 HPP00738 406 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 ZNF181Q2M3W8 571 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 GLYR1Q49A26 553 aaPredicted RBP19.13■□□□□ 0.65
ATG4D-201ENST00000309469 PLCZ1Q86YW0 608 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 MINDY2Q8NBR6 621 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 PAQR8Q8TEZ7 354 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 GHSRQ92847 366 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 ABCB10Q9NRK6 738 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 VSX1Q9NZR4 365 aaPredicted RBP19.13■□□□□ 0.65
ATG4D-201ENST00000309469 FKBP7Q9Y680 259 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 SHISA3A0PJX4 238 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 SMIM30A4D0T7 59 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 CCL3P10147 92 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 HLA-DOBP13765 273 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 TCEA1P23193 301 aaKnown RBP19.13■□□□□ 0.65
ATG4D-201ENST00000309469 PSMD7P51665 324 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 Q0VFX4 171 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 RPL22L1Q6P5R6 122 aaKnown RBP19.13■□□□□ 0.65
ATG4D-201ENST00000309469 MS4A15Q8N5U1 240 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 ADAD1Q96M93 576 aaKnown RBP19.13■□□□□ 0.65
ATG4D-201ENST00000309469 SH2D2AQ9NP31 389 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 CHST11Q9NPF2 352 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 ACOXLQ9NUZ1 547 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 ALKBH4Q9NXW9 302 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 B9D1Q9UPM9 204 aa19.13■□□□□ 0.65
ATG4D-201ENST00000309469 TBX1O43435 398 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 EIF1P41567 113 aaKnown RBP19.12■□□□□ 0.65
ATG4D-201ENST00000309469 CAV3P56539 151 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 FOXK1P85037 733 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 TLE3Q04726 772 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 CDK5R1Q15078 307 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 CCDC58Q4VC31 144 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 ZNF684Q5T5D7 378 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 SLC22A10Q63ZE4 541 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 CDC20BQ86Y33 519 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 ESX1Q8N693 406 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 NLGN4YQ8NFZ3 816 aaPredicted RBP19.12■□□□□ 0.65
ATG4D-201ENST00000309469 OR5M1Q8NGP8 315 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 AP3S1Q92572 193 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 NTNG2Q96CW9 530 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 SLC30A2Q9BRI3 323 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 RYDENQ9NUL5 291 aaKnown RBP19.12■□□□□ 0.65
ATG4D-201ENST00000309469 HPF1Q9NWY4 346 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 CMAHPQ9Y471 501 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 A0A0C4DFX4 3053 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 ADH6P28332 368 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 CHAF1BQ13112 559 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 MYBPHQ13203 477 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 MELKQ14680 651 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 C3orf33Q6P1S2 294 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 PLEKHG7Q6ZR37 379 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 CEACAM19Q7Z692 300 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 SMIM19Q96E16 107 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 MARCH7Q9H992 704 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 PROK2Q9HC23 129 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 KLHDC2Q9Y2U9 406 aa19.12■□□□□ 0.65
ATG4D-201ENST00000309469 SLC22A23A1A5C7 686 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 ISPDA4D126 451 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 PRR32B1ATL7 298 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 LOC110117498-PIK3R3F6TDL0 507 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 SC5DO75845 299 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 AKR7A3O95154 331 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 MTNR1BP49286 362 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 GDI2P50395 445 aaKnown RBP19.11■□□□□ 0.65
ATG4D-201ENST00000309469 NUBP1P53384 320 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 HES3Q5TGS1 186 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 LYSMD2Q8IV50 215 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 ZBTB8AQ96BR9 441 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 WDFY2Q96P53 400 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 INTS14Q96SY0 518 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 MNTQ99583 582 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 PPIL3Q9H2H8 161 aaKnown RBP19.11■□□□□ 0.65
ATG4D-201ENST00000309469 WDR76Q9H967 626 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 B3GALT5Q9Y2C3 310 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 UGT2A1Q9Y4X1 527 aa19.11■□□□□ 0.65
ATG4D-201ENST00000309469 A0A087WZY1 265 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 SLC35F4A4IF30 521 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 A6NIZ1 184 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 SLC16A7O60669 478 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 FZD7O75084 574 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 GPANK1O95872 356 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 CD1AP06126 327 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 EDNRAP25101 427 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 PSMB10P40306 273 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 RAP1BP61224 184 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 RAP1AP62834 184 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms