RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 CGGBP1Q9UFW8 167 aaPredicted RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 SLC22A13Q9Y226 551 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 DCTN6O00399 190 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 CBX7O95931 251 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 EIF1AXP47813 144 aaKnown RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 RBMS2Q15434 407 aaKnown RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 SMAD2Q15796 467 aaKnown RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 ATRAIDQ6UW56 229 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 KRT77Q7Z794 578 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF707Q96C28 371 aaPredicted RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 GFI1Q99684 422 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 SYNDIG1Q9H7V2 258 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 FITM1A5D6W6 292 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 NAP1L6A6NFF2 107 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 OGG1O15527 345 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 PPM1BO75688 479 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF28P17035 718 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 MAOAP21397 527 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 PRSS3P35030 304 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 BTG2P78543 158 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF776Q68DI1 518 aaPredicted RBP13.52□□□□□ -0.24
RUNX3-201ENST00000308873 OR7E24Q6IFN5 339 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 ASB16Q96NS5 453 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 THAP10Q9P2Z0 257 aaPredicted RBP13.52□□□□□ -0.24
RUNX3-201ENST00000308873 MOKQ9UQ07 419 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 HRH3Q9Y5N1 445 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 HEBP2Q9Y5Z4 205 aa13.52□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF106Q9H2Y7 1883 aaKnown RBP13.52□□□□□ -0.24
RUNX3-201ENST00000308873 EEF1E1-BLOC1S5C9J1V9 151 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 HCRTR1O43613 425 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 EGFP01133 1207 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 IGKV1D-16P01601 117 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 C5AR1P21730 350 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 LUMP51884 338 aaPredicted RBP13.52□□□□□ -0.25
RUNX3-201ENST00000308873 TFF2Q03403 129 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 GPAT4Q86UL3 456 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 FAM219AQ8IW50 185 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 TMEM185AQ8NFB2 350 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 OR2AK2Q8NG84 335 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 ATOH1Q92858 354 aaPredicted RBP13.52□□□□□ -0.25
RUNX3-201ENST00000308873 WNT2BQ93097 391 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 PNO1Q9NRX1 252 aaKnown RBP13.52□□□□□ -0.25
RUNX3-201ENST00000308873 KCNMB2Q9Y691 235 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 SLC22A23A1A5C7 686 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 CD53P19397 219 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 SLC2A5P22732 501 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 DPP4P27487 766 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 PBX2P40425 430 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 ALKBH1Q13686 389 aaKnown RBP13.52□□□□□ -0.25
RUNX3-201ENST00000308873 UNQ6126/PRO20091Q6UXV3 157 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 DND1Q8IYX4 353 aaKnown RBP13.52□□□□□ -0.25
RUNX3-201ENST00000308873 KDM8Q8N371 416 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 OR14A16Q8NHC5 309 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 MOGAT1Q96PD6 335 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 SLC39A1Q9NY26 324 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 SPAG17Q6Q759 2223 aa13.52□□□□□ -0.25
RUNX3-201ENST00000308873 PLSCR5A0PG75 271 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 G3V3Q6 166 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 XKRYO14609 159 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 TIMP1P01033 207 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 PPP3CBP16298 524 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 ADRA2CP18825 462 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 GPR143P51810 404 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 DMRTC1Q5HYR2 192 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 ZNF550Q7Z398 422 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 TAF8Q7Z7C8 310 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 SYS1Q8N2H4 156 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 NPEPL1Q8NDH3 523 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 SCARB1Q8WTV0 552 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 ASB12Q8WXK4 309 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 RGP1Q92546 391 aaPredicted RBP13.51□□□□□ -0.25
RUNX3-201ENST00000308873 HAVCR1Q96D42 359 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 OR8D2Q9GZM6 311 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 KIR3DX1Q9H7L2 352 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 DNAJB12Q9NXW2 375 aaKnown RBP13.51□□□□□ -0.25
RUNX3-201ENST00000308873 CHRNA9Q9UGM1 479 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 OR5K3A6NET4 321 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 C17orf51A8MQB3 221 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 TOR1AO14656 332 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 GPRIN2O60269 458 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 NDUFB6O95139 128 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 RAB3DO95716 219 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 TPMTP51580 245 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 SPOCK1Q08629 439 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 ILF3Q12906 894 aaKnown RBP eCLIP13.51□□□□□ -0.25
RUNX3-201ENST00000308873 PRICKLE4Q2TBC4 344 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 PRAMEF17Q5VTA0 474 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 LRFN4Q6PJG9 635 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 STK35Q8TDR2 534 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 RPP25Q9BUL9 199 aaKnown RBP13.51□□□□□ -0.25
RUNX3-201ENST00000308873 POFUT1Q9H488 388 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 FRRS1LQ9P0K9 344 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 ENTPD2Q9Y5L3 495 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 COL4A3Q01955 1670 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 ANKRD20A5PA0PJZ0 165 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 ADAM8P78325 824 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 PSG6Q00889 435 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 NHLRC3Q5JS37 347 aa13.51□□□□□ -0.25
RUNX3-201ENST00000308873 ZNF626Q68DY1 528 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms