RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 PPA2Q9H2U2 334 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 WDR76Q9H967 626 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 DIABLOQ9NR28 239 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 CMC2Q9NRP2 79 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 ARRDC5A6NEK1 342 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 F5H5P2 479 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 ADAM11O75078 769 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 NANOS3P60323 173 aaKnown RBP13.32□□□□□ -0.28
PTPN9-201ENST00000306726 TMEM44Q2T9K0 475 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 STPG1Q5TH74 334 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 TIGD3Q6B0B8 471 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 DGAT2L6Q6ZPD8 337 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 LINC00346Q8IVM7 164 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 CSNK1A1LQ8N752 337 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 CMBLQ96DG6 245 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 SCMH1Q96GD3 660 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 NRIP3Q9NQ35 241 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
PTPN9-201ENST00000306726 ADH1BP00325 375 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 NTSR1P30989 418 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 LSSP48449 732 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 DNASE1L1P49184 302 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 PPP2CBP62714 309 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 PPP2CAP67775 309 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 TMEM35AQ53FP2 167 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 GSG1LQ6UXU4 331 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 TMUB2Q71RG4 321 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 PRSS42Q7Z5A4 293 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 POMGNT2Q8NAT1 580 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 RAB7BQ96AH8 199 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 COMMD4Q9H0A8 199 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 GPR160Q9UJ42 338 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 FBXL21Q9UKT6 434 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 CFAP54Q96N23 3096 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 TRIM3O75382 744 aaPredicted RBP13.32□□□□□ -0.28
PTPN9-201ENST00000306726 RLN2P04090 185 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 ARRB1P49407 418 aaPredicted RBP13.32□□□□□ -0.28
PTPN9-201ENST00000306726 MC2RQ01718 297 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 ESPL1Q14674 2120 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 CORO6Q6QEF8 472 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 AVL9Q8NBF6 648 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 OR11G2Q8NGC1 345 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 RLN3Q8WXF3 142 aa13.32□□□□□ -0.28
PTPN9-201ENST00000306726 BTG1P62324 171 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 UBXN2BQ14CS0 331 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 CDK5R1Q15078 307 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 VN1R4Q7Z5H5 301 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 OR1E3Q8WZA6 343 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 GABRG3Q99928 467 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 FLRT3Q9NZU0 649 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 MOKQ9UQ07 419 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 DNAJC13O75165 2243 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 NCOR1O75376 2440 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 C17orf113A0A1B0GUU1 675 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 IFITM5A6NNB3 132 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 SLC25A12O75746 678 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 SLC2A1P11166 492 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 S100A11P31949 105 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 CAPZA2P47755 286 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 P2RX1P51575 399 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 S100A10P60903 97 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 GPR18Q14330 331 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 C1QL3Q5VWW1 255 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 GPR139Q6DWJ6 353 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 KRT77Q7Z794 578 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 OR4C16Q8NGL9 310 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 ZNF350Q9GZX5 532 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 TCEAL2Q9H3H9 227 aaPredicted RBP13.31□□□□□ -0.28
PTPN9-201ENST00000306726 C2orf42Q9NWW7 574 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 DTX4Q9Y2E6 619 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 TNRC18O15417 2968 aaPredicted RBP13.31□□□□□ -0.28
PTPN9-201ENST00000306726 TICRRQ7Z2Z1 1910 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 HCRTR1O43613 425 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 FADS1O60427 444 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 NGFRP08138 427 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 FREM3P0C091 2139 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 LIMK1P53667 647 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 C21orf58P58505 322 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 STARD6P59095 220 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 TAS2R43P59537 309 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 TAS2R20P59543 309 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 KCTD20Q7Z5Y7 419 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 LRRTM1Q86UE6 522 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 STK35Q8TDR2 534 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 LRRC46Q96FV0 321 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 NUDT22Q9BRQ3 303 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 SLC7A5P2Q9GIP4 190 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 SEC61A2Q9H9S3 476 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 BCL2L10Q9HD36 194 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 AKAP7Q9P0M2 348 aaPredicted RBP13.31□□□□□ -0.28
PTPN9-201ENST00000306726 CAMK2AQ9UQM7 478 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 HRH3Q9Y5N1 445 aa13.31□□□□□ -0.28
PTPN9-201ENST00000306726 TRAV8-7A0A075B6U6 113 aa13.3□□□□□ -0.28
PTPN9-201ENST00000306726 TMEM235A6NFC5 223 aa13.3□□□□□ -0.28
PTPN9-201ENST00000306726 IFNA6P05013 189 aa13.3□□□□□ -0.28
PTPN9-201ENST00000306726 ZNF806P0C7X5 589 aa13.3□□□□□ -0.28
PTPN9-201ENST00000306726 NID1P14543 1247 aa13.3□□□□□ -0.28
PTPN9-201ENST00000306726 ZNF10P21506 573 aaPredicted RBP13.3□□□□□ -0.28
PTPN9-201ENST00000306726 PRKAR1BP31321 381 aa13.3□□□□□ -0.28
PTPN9-201ENST00000306726 FAUP35544 74 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms