RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 H3BNX3 289 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 PRKACGP22612 351 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 COL8A1P27658 744 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 UGT2B10P36537 528 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 FXYD6P3P58550 94 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 ERVK-25P63136 954 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 P2RY6Q15077 328 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 TSC22D1Q15714 1073 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 C9orf135Q5VTT2 229 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 HMBOX1Q6NT76 420 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 SHQ1Q6PI26 577 aaKnown RBP19.71■□□□□ 0.75
HOXD4-201ENST00000306324 THSD4Q6ZMP0 1018 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 GPR137CQ8N3F9 429 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 OR6N1Q8NGY5 312 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 OR6X1Q8NH79 312 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 ASB10Q8WXI3 467 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 STMN2Q93045 179 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 NIPSNAP1Q9BPW8 284 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 DGCR6LQ9BY27 220 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 ENKD1Q9H0I2 346 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 OR52D1Q9H346 318 aa19.71■□□□□ 0.75
HOXD4-201ENST00000306324 MAGED1Q9Y5V3 778 aaPredicted RBP19.71■□□□□ 0.75
HOXD4-201ENST00000306324 ARRDC5A6NEK1 342 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 M0R3G1 203 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 LYZL6O75951 148 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF23P17027 643 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 IGHV1-2P23083 117 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 RPL27P61353 136 aaKnown RBP19.7■□□□□ 0.74
HOXD4-201ENST00000306324 ITGADQ13349 1161 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 SFRP5Q5T4F7 317 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 SP5Q6BEB4 398 aaPredicted RBP19.7■□□□□ 0.74
HOXD4-201ENST00000306324 HDDC2Q7Z4H3 204 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 OR5K1Q8NHB7 308 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF566Q969W8 418 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 NRBF2Q96F24 287 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 SLC25A44Q96H78 314 aaPredicted RBP19.7■□□□□ 0.74
HOXD4-201ENST00000306324 TSPAN32Q96QS1 320 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 LINC00470Q9BZP3 86 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 S100A14Q9HCY8 104 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF346Q9UL40 294 aaKnown RBP19.7■□□□□ 0.74
HOXD4-201ENST00000306324 ADAM18Q9Y3Q7 739 aa19.7■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF587BE7ETH6 402 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 CD14P08571 375 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 GSTM3P21266 225 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 CSNK1A1P48729 337 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 FOXG1P55316 489 aaPredicted RBP19.69■□□□□ 0.74
HOXD4-201ENST00000306324 SORDQ00796 357 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 RFX4Q33E94 735 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 ARMC4Q5T2S8 1044 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 ANKRD34AQ69YU3 496 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 MEX3BQ6ZN04 569 aaKnown RBP19.69■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF620Q6ZNG0 422 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 ABHD12BQ7Z5M8 362 aaPredicted RBP19.69■□□□□ 0.74
HOXD4-201ENST00000306324 C20orf196Q8IYI0 205 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 ATG16L2Q8NAA4 619 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 KISS1RQ969F8 398 aaPredicted RBP19.69■□□□□ 0.74
HOXD4-201ENST00000306324 CENPNQ96H22 339 aaPredicted RBP19.69■□□□□ 0.74
HOXD4-201ENST00000306324 SAMD8Q96LT4 415 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 PKP2Q99959 881 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 EGLN3Q9H6Z9 239 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 KIF17Q9P2E2 1029 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 GRHPRQ9UBQ7 328 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 HECTD1Q9ULT8 2610 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 PRR14LQ5THK1 2151 aa19.69■□□□□ 0.74
HOXD4-201ENST00000306324 NPIPB13A6NJU9 1138 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 NPIPB4C9JG80 1138 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 G3V2T6 193 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 IGHG1P01857 330 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 IGHMP01871 453 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 CDH2P19022 906 aaPredicted RBP19.68■□□□□ 0.74
HOXD4-201ENST00000306324 PSMB1P20618 241 aaKnown RBP19.68■□□□□ 0.74
HOXD4-201ENST00000306324 COX5AP20674 150 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 IL32P24001 234 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 SLC6A6P31641 620 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 CCKARP32238 428 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 ACVR1BP36896 505 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 CLRN1P58418 232 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 ROR2Q01974 943 aaKnown RBP19.68■□□□□ 0.74
HOXD4-201ENST00000306324 RUNX1T1Q06455 604 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 PHYHD1Q5SRE7 291 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 RASSF6Q6ZTQ3 369 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 LINGO2Q7L985 606 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 ICA1LQ8NDH6 482 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 LRR1Q96L50 414 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 HDHD5Q9BXW7 423 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF556Q9HAH1 456 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 B3GAT2Q9NPZ5 323 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 TAS2R16Q9NYV7 291 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 STX18Q9P2W9 335 aaKnown RBP19.68■□□□□ 0.74
HOXD4-201ENST00000306324 GPR52Q9Y2T5 361 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 CDH10Q9Y6N8 788 aa19.68■□□□□ 0.74
HOXD4-201ENST00000306324 CIB4A0PJX0 185 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 TUBAL3A6NHL2 446 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 SOX14O95416 240 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 PPP1R3DO95685 299 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 ITGA5P08648 1049 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 PGA4P0DJD7 388 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 PGA3P0DJD8 388 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 ANXA8P13928 327 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 ACADSP16219 412 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms