RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 C6orf120Q7Z4R8 191 aa10□□□□□ -0.81
LSM3-201ENST00000306024 NRROSQ86YC3 692 aa10□□□□□ -0.81
LSM3-201ENST00000306024 HORMAD2Q8N7B1 307 aa10□□□□□ -0.81
LSM3-201ENST00000306024 MAFIPQ8WZ33 124 aa10□□□□□ -0.81
LSM3-201ENST00000306024 WDR89Q96FK6 387 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 UPB1Q9UBR1 384 aa10□□□□□ -0.81
LSM3-201ENST00000306024 GHRLQ9UBU3 117 aa10□□□□□ -0.81
LSM3-201ENST00000306024 KLK11Q9UBX7 282 aa10□□□□□ -0.81
LSM3-201ENST00000306024 A0A0D9SG52 128 aa10□□□□□ -0.81
LSM3-201ENST00000306024 OR6C65A6NJZ3 312 aa10□□□□□ -0.81
LSM3-201ENST00000306024 FOXE1O00358 373 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 PPM1DO15297 605 aa10□□□□□ -0.81
LSM3-201ENST00000306024 FRS3O43559 492 aa10□□□□□ -0.81
LSM3-201ENST00000306024 GCM2O75603 506 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 AQP8O94778 261 aa10□□□□□ -0.81
LSM3-201ENST00000306024 EDNRAP25101 427 aa10□□□□□ -0.81
LSM3-201ENST00000306024 CERS1P27544 350 aa10□□□□□ -0.81
LSM3-201ENST00000306024 RBMS2Q15434 407 aaKnown RBP10□□□□□ -0.81
LSM3-201ENST00000306024 ZXDCQ2QGD7 858 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 TMEM71Q6P5X7 295 aa10□□□□□ -0.81
LSM3-201ENST00000306024 LDLRAD3Q86YD5 345 aa10□□□□□ -0.81
LSM3-201ENST00000306024 POGLUT1Q8NBL1 392 aa10□□□□□ -0.81
LSM3-201ENST00000306024 FAM71CQ8NEG0 241 aa10□□□□□ -0.81
LSM3-201ENST00000306024 STK35Q8TDR2 534 aa10□□□□□ -0.81
LSM3-201ENST00000306024 RXFP4Q8TDU9 374 aa10□□□□□ -0.81
LSM3-201ENST00000306024 C16orf78Q8WTQ4 265 aa10□□□□□ -0.81
LSM3-201ENST00000306024 NAT6Q93015 286 aa10□□□□□ -0.81
LSM3-201ENST00000306024 SCARF2Q96GP6 870 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 VRK1Q99986 396 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 SYNPO2LQ9H987 977 aa10□□□□□ -0.81
LSM3-201ENST00000306024 TAS2R5Q9NYW4 299 aa10□□□□□ -0.81
LSM3-201ENST00000306024 C5AR2Q9P296 337 aa10□□□□□ -0.81
LSM3-201ENST00000306024 PCOLCE2Q9UKZ9 415 aa10□□□□□ -0.81
LSM3-201ENST00000306024 TMEM218A2RU14 115 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 FAM221BA6H8Z2 402 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 H0YGG7 62 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 PRICKLE3O43900 615 aaPredicted RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 RECKO95980 971 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 SAGP10523 405 aaPredicted RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 BTCP35070 178 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 MPLP40238 635 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 RBM34P42696 430 aaKnown RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 EPHA4P54764 986 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 ARF3P61204 181 aaPredicted RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 NKAPLQ5M9Q1 402 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 ZNF660Q6AZW8 331 aaPredicted RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 FCRLAQ7L513 359 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 TMEM200AQ86VY9 491 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 GID4Q8IVV7 300 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 PHOSPHO1Q8TCT1 267 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 SMIM4Q8WVI0 70 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 HSD17B8Q92506 261 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 MRPL48Q96GC5 212 aaKnown RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 MS4A8Q9BY19 250 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 PLA2G12AQ9BZM1 189 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 OR51M1Q9H341 326 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 HRH4Q9H3N8 390 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 MED20Q9H944 212 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 TMEM74BQ9NUR3 256 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 FBXO4Q9UKT5 387 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 C5orf51A6NDU8 294 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 PRAMEF25A6NGN4 478 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 C8orf89P0DMQ9 161 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 NQO2P16083 231 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 SLC36A2Q495M3 483 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 RNLSQ5VYX0 342 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 SPICQ8N5J4 248 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 OR1S2Q8NGQ3 325 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 C4orf36Q96KX1 117 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 ORAI3Q9BRQ5 295 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 ZNF350Q9GZX5 532 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 SLC25A18Q9H1K4 315 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 TCF7L1Q9HCS4 588 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 TESQ9UGI8 421 aaKnown RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 SERTAD3Q9UJW9 196 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 COL4A3Q01955 1670 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 C1orf226A1L170 272 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 RIIAD1A6NNX1 92 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 FFAR1O14842 300 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 SEMA7AO75326 666 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 AKR7A3O95154 331 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 ETHE1O95571 254 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 ZNF888P0CJ79 500 aaPredicted RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 ST6GAL1P15907 406 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 PRKXP51817 358 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 ST3GAL3Q11203 375 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 FRRS1Q6ZNA5 592 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 OLIG3Q7RTU3 272 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 BBS1Q8NFJ9 593 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 OR2L5Q8NG80 312 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 OR2AK2Q8NG84 335 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 OR10R2Q8NGX6 335 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 SAMD8Q96LT4 415 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 SMCO4Q9NRQ5 59 aa9.99□□□□□ -0.81
LSM3-201ENST00000306024 ASCC3Q8N3C0 2202 aaKnown RBP9.99□□□□□ -0.81
LSM3-201ENST00000306024 MEIS3P1A6NDR6 274 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 ACOT7O00154 380 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 EIF1BO60739 113 aaKnown RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 RNF224P0DH78 156 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 MGMTP16455 207 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms