RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ONECUT2O95948 504 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 MT-ND5P03915 603 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PCCBP05166 539 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 CTNNB1P35222 781 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 VIPR2P41587 438 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 GDI2P50395 445 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 TAS2R41P59536 307 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PSG6Q00889 435 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SSBP1Q04837 148 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 TRMT12Q53H54 448 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 TANGO2Q6ICL3 276 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 RPL22L1Q6P5R6 122 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 DPY19L2P2Q6ZN68 376 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 CCDC116Q8IYX3 515 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 C2orf73Q8N5S3 287 aaPredicted RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 BPIFCQ8NFQ6 507 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 OR51A4Q8NGJ6 313 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 FANK1Q8TC84 345 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 TMEM239Q8WW34 195 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 XAGE5Q8WWM1 108 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 MCHR1Q99705 422 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 USB1Q9BQ65 265 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 PELOQ9BRX2 385 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 TEX12Q9BXU0 123 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 NOX3Q9HBY0 568 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SLC2A8Q9NY64 477 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 GLS2Q9UI32 602 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PRKAB1Q9Y478 270 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF780BQ9Y6R6 833 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 KIF26BQ2KJY2 2108 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 TRAV27A0A087WT01 109 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 A0A087WUJ7 227 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 TBC1D3IA0A087WXS9 549 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PRR23AA6NEV1 266 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 URADA6NGE7 173 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 NPIPB13A6NJU9 1138 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF98A6NK75 572 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF879B4DU55 563 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 NPIPB4C9JG80 1138 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 M0R233 179 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ARPC1BO15143 372 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 TO15178 435 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ERI3O43414 337 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 PPIHO43447 177 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 XRCC3O43542 346 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 DHFRP00374 187 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SERPINA3P01011 423 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PPP3CBP16298 524 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ACVR1BP36896 505 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 BUD31P41223 144 aaPredicted RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 CBX5P45973 191 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SLC6A9P48067 706 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PSMD4P55036 377 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 ACTA2P62736 377 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ACTG2P63267 376 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 MRPS21P82921 87 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 SPEM2Q0P670 501 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SNTB2Q13425 540 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 AMZ1Q400G9 498 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 MRPL2Q5T653 305 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF697Q5TEC3 545 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ARHGAP11AQ6P4F7 1023 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ANKRD16Q6P6B7 361 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 NPSR1Q6W5P4 371 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ABHD13Q7L211 337 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF440Q8IYI8 595 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PUSL1Q8N0Z8 303 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 OR2AK2Q8NG84 335 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 Q96M85 177 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 AMELYQ99218 206 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 RNF126Q9BV68 326 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SLC7A5P2Q9GIP4 190 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SLC6A17Q9H1V8 727 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SLC25A32Q9H2D1 315 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 RYDENQ9NUL5 291 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 KLHL28Q9NXS3 571 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 TBC1D29Q9UFV1 150 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PPIEQ9UNP9 301 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 SLC5A6Q9Y289 635 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 PMS2P1A4D2B8 440 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF860A6NHJ4 632 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 COLCA2A8K830 154 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 C9JQL5 133 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 HCRTR1O43613 425 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 APODP05090 189 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ITGA5P08648 1049 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ASAH2BP0C7U1 165 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 GKN3PP0CG01 181 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF888P0CJ79 500 aaPredicted RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 PPIAP62937 165 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 MRPS10P82664 201 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 DAB2P98082 770 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 TP53I3Q53FA7 332 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF57Q68EA5 555 aaPredicted RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 SFRP4Q6FHJ7 346 aaPredicted RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 ANGPTL8Q6UXH0 198 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 MAMSTRQ6ZN01 415 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 CHMP1BQ7LBR1 199 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF615Q8N8J6 731 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 CAMKVQ8NCB2 501 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms