RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GBF1Q92538 1859 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 EIF1AYO14602 144 aaKnown RBP11.96□□□□□ -0.49
TRIM35-201ENST00000305364 PTP4A3O75365 173 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 FGF18O76093 207 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 ZFPL1O95159 310 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 ADH5P11766 374 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 NDUFS1P28331 727 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 EIF1AXP47813 144 aaKnown RBP11.96□□□□□ -0.49
TRIM35-201ENST00000305364 GPR143P51810 404 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 SQSTM1Q13501 440 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 EIF2B1Q14232 305 aaKnown RBP11.96□□□□□ -0.49
TRIM35-201ENST00000305364 PWWP2BQ6NUJ5 590 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 ADIPOR2Q86V24 386 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 OR4D10Q8NGI6 311 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 OR6K3Q8NGY3 331 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 TMED6Q8WW62 240 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 PGLYRP3Q96LB9 341 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 GAREM1Q9H706 876 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 PIPOXQ9P0Z9 390 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 DHDHQ9UQ10 334 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 SPTBN2O15020 2390 aa11.96□□□□□ -0.49
TRIM35-201ENST00000305364 MYOFQ9NZM1 2061 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 SLC31A1O15431 190 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 OR2F2O95006 317 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 NID1P14543 1247 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 RPS27P42677 84 aaKnown RBP11.96□□□□□ -0.5
TRIM35-201ENST00000305364 H2BFSP57053 126 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 EIF5AP63241 154 aaKnown RBP11.96□□□□□ -0.5
TRIM35-201ENST00000305364 EFNB1P98172 346 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 GPM6BQ13491 265 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 OR2F1Q13607 317 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 OR7E24Q6IFN5 339 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 ZNF550Q7Z398 422 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 MRGPREQ86SM8 312 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 TEX19Q8NA77 164 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 OR52E1Q8NGJ3 308 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 SLC25A36Q96CQ1 311 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 FOXN4Q96NZ1 517 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 TSSK2Q96PF2 358 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.96□□□□□ -0.5
TRIM35-201ENST00000305364 KCMF1Q9P0J7 381 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 ZMIZ1Q9ULJ6 1067 aa11.96□□□□□ -0.5
TRIM35-201ENST00000305364 F5P12259 2224 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 WASH3PC4AMC7 463 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 H7C1C5 153 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 SPARCP09486 303 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 VSIG10L2P0DP72 767 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 BDKRB2P30411 391 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 KCNJ3P48549 501 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 LCN6P62502 163 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 DUSP2Q05923 314 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 ALKBH1Q13686 389 aaKnown RBP11.95□□□□□ -0.5
TRIM35-201ENST00000305364 PRRT3Q5FWE3 981 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 PGAP1Q75T13 922 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 SLC16A13Q7RTY0 426 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 PEG10Q86TG7 708 aaKnown RBP11.95□□□□□ -0.5
TRIM35-201ENST00000305364 LRRTM1Q86UE6 522 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 ZNF547Q8IVP9 402 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 MCATQ8IVS2 390 aaKnown RBP11.95□□□□□ -0.5
TRIM35-201ENST00000305364 PPP1R1CQ8WVI7 109 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 WNT2BQ93097 391 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 SPHK1Q9NYA1 384 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 STEAP1Q9UHE8 339 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 C11orf98E9PRG8 122 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 PRH1P02810 166 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 TMIGD3P0DMS9 266 aaPredicted RBP11.95□□□□□ -0.5
TRIM35-201ENST00000305364 APEHP13798 732 aaKnown RBP11.95□□□□□ -0.5
TRIM35-201ENST00000305364 TYRP1P17643 537 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 B2MP61769 119 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 KCNAB1Q14722 419 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 ACOT7LQ6ZUV0 252 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 SLC22A8Q8TCC7 542 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 C3orf49Q96BT1 292 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 REG4Q9BYZ8 158 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 SLC22A11Q9NSA0 550 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 ZFP57Q9NU63 452 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 EDDM13A0A1B0GTR0 161 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 SLC25A12O75746 678 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 CST9Q5W186 159 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 C3orf33Q6P1S2 294 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 UBE3DQ7Z6J8 389 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 PXKQ7Z7A4 578 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 DND1Q8IYX4 353 aaKnown RBP11.95□□□□□ -0.5
TRIM35-201ENST00000305364 MED9Q9NWA0 146 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 NPTNQ9Y639 398 aa11.95□□□□□ -0.5
TRIM35-201ENST00000305364 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 SULT1C2O00338 296 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 GLSO94925 669 aaPredicted RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 RD3LP0DJH9 198 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 CSF2RAP15509 400 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 RPA2P15927 270 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 MAT1AQ00266 395 aaKnown RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 CDK3Q00526 305 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 DUSP8Q13202 625 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 ELAVL3Q14576 367 aaKnown RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 DPY19L4Q7Z388 723 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 PLPP7Q8NBV4 271 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 CD300LFQ8TDQ1 290 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 RNF141Q8WVD5 230 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms