RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 PTRH2Q9Y3E5 179 aaKnown RBP13.16□□□□□ -0.3
SMG8-201ENST00000300917 PCDHGB7Q9Y5F8 929 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 A0A1W2PPC1 479 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 PMS2P1A4D2B8 440 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 OR6C70A6NIJ9 312 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 TO15178 435 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 PLA2G10O15496 165 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 LANCL1O43813 399 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 ATF1P18846 271 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 CCKBRP32239 447 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 CDC20Q12834 499 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 SELENBP1Q13228 472 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 FAM69AQ5T7M9 428 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 DEFB126Q9BYW3 111 aa13.16□□□□□ -0.3
SMG8-201ENST00000300917 MRM2Q9UI43 246 aaKnown RBP13.16□□□□□ -0.3
SMG8-201ENST00000300917 RPS11P62280 158 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMG8-201ENST00000300917 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.15□□□□□ -0.3
SMG8-201ENST00000300917 RSBN1Q5VWQ0 802 aaPredicted RBP13.15□□□□□ -0.3
SMG8-201ENST00000300917 HBMQ6B0K9 141 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 ZNF517Q6ZMY9 492 aaPredicted RBP13.15□□□□□ -0.3
SMG8-201ENST00000300917 KRT74Q7RTS7 529 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 AKAP14Q86UN6 197 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 WDFY1Q8IWB7 410 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 OR2T4Q8NH00 348 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 NAT6Q93015 286 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 NLKQ9UBE8 527 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 TRAPPC4Q9Y296 219 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 CTLA4P16410 223 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 SFTPDP35247 375 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 SRP9P49458 86 aaKnown RBP13.15□□□□□ -0.3
SMG8-201ENST00000300917 GPR50Q13585 617 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 GRINAQ7Z429 371 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 FAM220AQ7Z4H9 259 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 WDR5BQ86VZ2 330 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 IL17RDQ8NFM7 739 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 OR51A4Q8NGJ6 313 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 ENKURQ8TC29 256 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 JSRP1Q96MG2 331 aaPredicted RBP13.15□□□□□ -0.3
SMG8-201ENST00000300917 PPP4R1LQ9P1A2 415 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 RALGAPA1Q6GYQ0 2036 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 A0A1W2PNR3 127 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 A8MVM7 634 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 EEF1E1O43324 174 aaKnown RBP13.15□□□□□ -0.3
SMG8-201ENST00000300917 NR4A2P43354 598 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 EIF1AXP47813 144 aaKnown RBP13.15□□□□□ -0.3
SMG8-201ENST00000300917 SLC26A5P58743 744 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 RPS18P62269 152 aaKnown RBP13.15□□□□□ -0.3
SMG8-201ENST00000300917 HSD17B12Q53GQ0 312 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 MS4A15Q8N5U1 240 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 NSMAFQ92636 917 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 GPX7Q96SL4 187 aaPredicted RBP13.15□□□□□ -0.3
SMG8-201ENST00000300917 SEMA4CQ9C0C4 833 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 TGIF2Q9GZN2 237 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 PPP1R3EQ9H7J1 279 aa13.15□□□□□ -0.3
SMG8-201ENST00000300917 A0A0G2JK05 382 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 OR6C76A6NM76 312 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 D6RAR5 112 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 PIN1P1O15428 100 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 FLRT2O43155 660 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 WNT11O96014 354 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 FBXO45P0C2W1 286 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 TALDO1P37837 337 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 POU3F1Q03052 451 aaPredicted RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 YOD1Q5VVQ6 348 aaPredicted RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 PRSS45Q7RTY3 260 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 TIGD4Q8IY51 512 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 RGP1Q92546 391 aaPredicted RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 TXNDC15Q96J42 360 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 SLCO1C1Q9NYB5 712 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 MYOTQ9UBF9 498 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 FBXL2Q9UKC9 423 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 CACNA1HO95180 2353 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 ZNF593O00488 134 aaPredicted RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 EIF1AYO14602 144 aaKnown RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 IDH3BO43837 385 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 CCNKO75909 580 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 KRT8P05787 483 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 THBS2P35442 1172 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 KIR2DL3P43628 341 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 INSM1Q01101 510 aaPredicted RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 GGTLC2Q14390 218 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 HYAL4Q2M3T9 481 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 CEP78Q5JTW2 689 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 RPL22L1Q6P5R6 122 aaKnown RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 GPAT4Q86UL3 456 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 LINC00346Q8IVM7 164 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 GDPD1Q8N9F7 314 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 MRPL15Q9P015 296 aaKnown RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 RABL2AQ9UBK7 228 aaPredicted RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 GPN3Q9UHW5 284 aaPredicted RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 PRRC2CQ9Y520 2896 aaKnown RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 A0A1W2PQD3 144 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 TOX3O15405 576 aaPredicted RBP13.14□□□□□ -0.31
SMG8-201ENST00000300917 OGG1O15527 345 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 F10P00742 488 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 MAS1P04201 325 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 FCER2P06734 321 aa13.14□□□□□ -0.31
SMG8-201ENST00000300917 ADRB1P08588 477 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms