RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 LAMP5Q9UJQ1 280 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 EFCAB7A8K855 629 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 PYCARD-AS1I3L0S3 204 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 PPM1BO75688 479 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 PROS1P07225 676 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 PSMA6P60900 246 aaKnown RBP22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 RPL18Q07020 188 aaKnown RBP22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 HYAL1Q12794 435 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 BAIAP2L2Q6UXY1 529 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 FAM122BQ7Z309 247 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 ARHGEF39Q8N4T4 335 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 OR51D1Q8NGF3 324 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 PMM1Q92871 262 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 SPEF1Q9Y4P9 236 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 PIAS3Q9Y6X2 628 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 ANXA2P2A6NMY6 339 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 KDM4BO94953 1096 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 IFNA7P01567 189 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 ANXA2P07355 339 aaKnown RBP22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 CD14P08571 375 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 MESTQ5EB52 335 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 WDR45BQ5MNZ6 344 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 FAM69AQ5T7M9 428 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 FAM198BQ6UWH4 519 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 ZNF563Q8TA94 476 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 NSMAFQ92636 917 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 DVL3Q92997 716 aaPredicted RBP22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 MTIF3Q9H2K0 278 aaKnown RBP22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 SEMA6CQ9H3T2 930 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 GRHPRQ9UBQ7 328 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 SEMA4FO95754 770 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 GABRG2P18507 467 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 RAG2P55895 527 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 PRPS1P60891 318 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 HTR4Q13639 388 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 PM20D2Q8IYS1 436 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 OR8S1Q8NH09 359 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 ZDHHC1Q8WTX9 485 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 HAVCR1Q96D42 359 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 ADOQ96SZ5 270 aa22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 MYEF2Q9P2K5 600 aaKnown RBP22.16■■□□□ 1.14
SPTSSA-201ENST00000298130 CFAP54Q96N23 3096 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 ANKRD20A5PA0PJZ0 165 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 SMAD9O15198 467 aaKnown RBP22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 TPD52L2O43399 206 aaKnown RBP22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 RLN1P04808 185 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 TOMM34Q15785 309 aaPredicted RBP22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 SLC35D3Q5M8T2 416 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 TSPAN32Q96QS1 320 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 OR8D2Q9GZM6 311 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 NKX2-4Q9H2Z4 354 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 MMP25Q9NPA2 562 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 NPDC1Q9NQX5 325 aaPredicted RBP22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 DZANK1Q9NVP4 752 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 KCNG2Q9UJ96 466 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 POMT2Q9UKY4 750 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 CYP8B1Q9UNU6 501 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 AP2S1P53680 142 aaPredicted RBP22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 OPCMLQ14982 345 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 PCGF3Q3KNV8 242 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 MANEAQ5SRI9 462 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 PRAMEF17Q5VTA0 474 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 METTL11BQ5VVY1 283 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 LRRN1Q6UXK5 716 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 GLDNQ6ZMI3 551 aaPredicted RBP22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 SLC16A9Q7RTY1 509 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 OR5M1Q8NGP8 315 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 SFXN2Q96NB2 322 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 GAL3ST4Q96RP7 486 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 NXF5Q9H1B4 397 aaKnown RBP22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 SLC6A5Q9Y345 797 aa22.15■■□□□ 1.14
SPTSSA-201ENST00000298130 TGM6O95932 706 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 HLA-DQA2P01906 255 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 THEGLP0DJG4 465 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 KLHL26Q53HC5 615 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 LRRTM1Q86UE6 522 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 ZSCAN1Q8NBB4 408 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 GINS4Q9BRT9 223 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 PLEKHA1Q9HB21 404 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 NPTNQ9Y639 398 aa22.14■■□□□ 1.14
SPTSSA-201ENST00000298130 C17orf105B2RV13 164 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 ECDO95905 644 aaPredicted RBP22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 IGHV4-34P06331 123 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 VSIG10L2P0DP72 767 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 TACR3P29371 465 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 SHHQ15465 462 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 AANATQ16613 207 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 ATG4DQ86TL0 474 aaPredicted RBP22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 BIVMQ86UB2 503 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 PRSS58Q8IYP2 241 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 PRSS35Q8N3Z0 413 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 FAM160A2Q8N612 972 aaPredicted RBP22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 ZNF615Q8N8J6 731 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 ASB12Q8WXK4 309 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 SLC25A36Q96CQ1 311 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 DHRS9Q9BPW9 319 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 SLITRK2Q9H156 845 aa22.14■■□□□ 1.13
SPTSSA-201ENST00000298130 CLDN4O14493 209 aa22.13■■□□□ 1.13
SPTSSA-201ENST00000298130 FAM174AQ8TBP5 190 aa22.13■■□□□ 1.13
SPTSSA-201ENST00000298130 RLN3Q8WXF3 142 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms