RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 BCL2L15Q5TBC7 163 aa10.65□□□□□ -0.7
RHO-201ENST00000296271 LRRN1Q6UXK5 716 aa10.65□□□□□ -0.7
RHO-201ENST00000296271 TPRA1Q86W33 373 aa10.65□□□□□ -0.7
RHO-201ENST00000296271 SIAH3Q8IW03 269 aa10.65□□□□□ -0.7
RHO-201ENST00000296271 SPEM1Q8N4L4 309 aa10.65□□□□□ -0.7
RHO-201ENST00000296271 YIPF5Q969M3 257 aa10.65□□□□□ -0.7
RHO-201ENST00000296271 PELOQ9BRX2 385 aaKnown RBP10.65□□□□□ -0.7
RHO-201ENST00000296271 SLC19A3Q9BZV2 496 aa10.65□□□□□ -0.7
RHO-201ENST00000296271 SLCO1C1Q9NYB5 712 aa10.65□□□□□ -0.7
RHO-201ENST00000296271 CPAMD8Q8IZJ3 1885 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 TRAV8-7A0A075B6U6 113 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 A0A1W2PQM1 296 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 ZNF879B4DU55 563 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 INMT-MINDY4F8WBC2 141 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 SUSD5O60279 629 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 ABHD16AO95870 558 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 HLA-DQA2P01906 255 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 MT-ND4P03905 459 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 FBXO45P0C2W1 286 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 ARSBP15848 533 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 C19orf57Q0VDD7 668 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 ACKR1Q16570 336 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 FCRLAQ7L513 359 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 BEST4Q8NFU0 473 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 DNASE2BQ8WZ79 361 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 HLA-CQ95604 372 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 ARL5BQ96KC2 179 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 OR6C1Q96RD1 312 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 SLC7A5P2Q9GIP4 190 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 EXOSC3Q9NQT5 275 aaKnown RBP10.65□□□□□ -0.71
RHO-201ENST00000296271 ADAM30Q9UKF2 790 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 VDAC3Q9Y277 283 aa10.65□□□□□ -0.71
RHO-201ENST00000296271 MRPS17Q9Y2R5 130 aaKnown RBP10.65□□□□□ -0.71
RHO-201ENST00000296271 EML6Q6ZMW3 1958 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 TMED7-TICAM2A0A0A6YYA0 188 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 TRAV1-2A0A0B4J238 106 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 CENPXA8MT69 81 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 ALG1L2C9J202 215 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 MAS1P04201 325 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 HIST1H2ABP04908 130 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 CD53P19397 219 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 RBMS1P29558 406 aaKnown RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 SLC6A1P30531 599 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 DHPSP49366 369 aaPredicted RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 SNRPD2P62316 118 aaKnown RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 RNF4P78317 190 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 PLA1AQ53H76 456 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 SLC6A19Q695T7 634 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 PWWP2BQ6NUJ5 590 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 FAAP20Q6NZ36 180 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 MZT2BQ6NZ67 158 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 ARSKQ6UWY0 536 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 HIST3H2AQ7L7L0 130 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 SLC29A4Q7RTT9 530 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 SLC16A9Q7RTY1 509 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 CDC20BQ86Y33 519 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 SLITRK4Q8IW52 837 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 PRSS35Q8N3Z0 413 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 APCDD1LQ8NCL9 501 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 DAZLQ92904 295 aaKnown RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 HIST1H2ACQ93077 130 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 SLC25A38Q96DW6 304 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 MARVELD1Q9BSK0 173 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 CHRDQ9H2X0 955 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 EVA1AQ9H8M9 152 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 NUDT15Q9NV35 164 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 MED11Q9P086 117 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 COPS7AQ9UBW8 275 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 SLC22A13Q9Y226 551 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 ZNF281Q9Y2X9 895 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 TMED7Q9Y3B3 224 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 FADS1O60427 444 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 CTLA4P16410 223 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 GIFP27352 417 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 CXCL12P48061 93 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 INSM1Q01101 510 aaPredicted RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 FMODQ06828 376 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 EFR3AQ14156 821 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 TRAM1Q15629 374 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 NTRK2Q16620 822 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 COL28A1Q2UY09 1125 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 SLC35D3Q5M8T2 416 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 FAM199XQ6PEV8 388 aaPredicted RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 UNQ9370/PRO34162Q6UXP9 181 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 ZNF441Q8N8Z8 693 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 ZNF417Q8TAU3 575 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 LIPHQ8WWY8 451 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 ZC3HAV1LQ96H79 300 aaKnown RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 FAM210AQ96ND0 272 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 ZNF587Q96SQ5 575 aaPredicted RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 CHRNA10Q9GZZ6 450 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 LAMP5Q9UJQ1 280 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 GTF2A1LQ9UNN4 478 aa10.64□□□□□ -0.71
RHO-201ENST00000296271 PCDHGA9Q9Y5G4 932 aaKnown RBP10.64□□□□□ -0.71
RHO-201ENST00000296271 A0A0A6YYJ9 748 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 LY6G6EA0A0G2JKS1 128 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 AKR7A2O43488 359 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 SLC16A7O60669 478 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 PNPP00491 289 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 CCL7P80098 99 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms