RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 IFT172Q9UG01 1749 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 H0YIV9 168 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 MTNR1BP49286 362 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 PLEKHS1Q5SXH7 462 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 GPR45Q9Y5Y3 372 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SPP1P10451 314 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 HIST1H3AP68431 136 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 MARCH8Q5T0T0 291 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 PGAP3Q96FM1 320 aaPredicted RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SYNGR4O95473 234 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 RPS12P25398 132 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 ACAA2P42765 397 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 F2RL1P55085 397 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 MAVSQ7Z434 540 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR5AP2Q8NGF4 316 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR5D18Q8NGL1 313 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 PACRGQ96M98 296 aaPredicted RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 UBQLN3Q9H347 655 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR1A2Q9Y585 309 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 LCATP04180 440 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 UQCC3Q6UW78 93 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 RBMXL3Q8N7X1 1067 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 HSD17B8Q92506 261 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SIRT7Q9NRC8 400 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 KLK4Q9Y5K2 254 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 FAM72CH0Y354 149 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 RAB29O14966 203 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 HTR2CP28335 458 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC10A2Q12908 348 aaPredicted RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC36A2Q495M3 483 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 CLLU1Q5K131 121 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 FAM72AQ5TYM5 149 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 FAM72DQ6L9T8 149 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 FAM72BQ86X60 149 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 FUBP1Q96AE4 644 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC12A9Q9BXP2 914 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 ALOXE3Q9BYJ1 711 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR10A5Q9H207 317 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR10A2Q9H208 303 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 GHRLQ9UBU3 117 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 LOC100289279A0A1B0GTE1 492 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 FBLL1A6NHQ2 334 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 RBP2P50120 134 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 PCBP4P57723 403 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 ISCA2Q86U28 154 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 KDF1Q8NAX2 398 aaPredicted RBP10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR52B4Q8NGK2 314 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC22A18Q96BI1 424 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 DHRS4Q9BTZ2 278 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 SELENOIQ9C0D9 397 aa10.93□□□□□ -0.66
SHROOM3-201ENST00000296043 OR2B11Q5JQS5 317 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 ADGRG3Q86Y34 549 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 OR5D14Q8NGL3 314 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 OR9A2Q8NGT5 310 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 ULBP3Q9BZM4 244 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 PRAMEF11O60813 436 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 RRASP10301 218 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 LPCAT3Q6P1A2 487 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 LYPD8Q6UX82 237 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 TSLPQ969D9 159 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 C1QTNF2Q9BXJ5 285 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 A0A0D9SEW6 157 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 SLURP2P0DP57 97 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 ACTR1AP61163 376 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 SNRPNP63162 240 aaKnown RBP10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 OR51A4Q8NGJ6 313 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 OR1J1Q8NGS3 322 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 SNX22Q96L94 193 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 CCDC187A0A096LP49 1063 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 TCRBV16S1A1N1A0A5B0 115 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 EFNA3P52797 238 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 ESPNLQ6ZVH7 1005 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 ENDOGQ14249 297 aaKnown RBP10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 TBPL2Q6SJ96 375 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 FAM57BQ71RH2 274 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 OR51A2Q8NGJ7 313 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 IL17FQ96PD4 163 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 NUDT22Q9BRQ3 303 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 IER2Q9BTL4 223 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 SMOC2Q9H3U7 446 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 FAM124BQ9H5Z6 455 aaPredicted RBP10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 TAS2R5Q9NYW4 299 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 COL1A2P08123 1366 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 TMEM212A6NML5 194 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 A8MVM7 634 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 HSD17B6O14756 317 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 IVDP26440 423 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 FFAR4Q5NUL3 377 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 ZFPM2Q8WW38 1151 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 MS4A4EQ96PG1 132 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 MYADMQ96S97 322 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 TLR9Q9NR96 1032 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 PRODH2Q9UF12 536 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 A3GALT2U3KPV4 340 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 TRDV1A0A1B0GX56 115 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 PIRO00625 290 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 TP53I11O14683 189 aa10.92□□□□□ -0.66
SHROOM3-201ENST00000296043 ITGB8P26012 769 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms