RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MARVELD2Q8N4S9 558 aa19.36■□□□□ 0.69
PDLIM3-203ENST00000284771 ZNF555Q8NEP9 628 aa19.36■□□□□ 0.69
PDLIM3-203ENST00000284771 OR4K13Q8NH42 304 aa19.36■□□□□ 0.69
PDLIM3-203ENST00000284771 MUS81Q96NY9 551 aa19.36■□□□□ 0.69
PDLIM3-203ENST00000284771 DDOQ99489 341 aa19.36■□□□□ 0.69
PDLIM3-203ENST00000284771 AASSQ9UDR5 926 aa19.36■□□□□ 0.69
PDLIM3-203ENST00000284771 GMPPBQ9Y5P6 360 aa19.36■□□□□ 0.69
PDLIM3-203ENST00000284771 INTS1Q8N201 2190 aaKnown RBP19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 ZNF724A8MTY0 619 aa19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 YES1P07947 543 aa19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 HOXD4P09016 255 aaPredicted RBP19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 ACVR1BP36896 505 aa19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 FOXF2Q12947 444 aa19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 SF3B4Q15427 424 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 TTC23Q5W5X9 447 aa19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 NCCRP1Q6ZVX7 275 aaPredicted RBP19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 NAXEQ8NCW5 288 aa19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 INTS12Q96CB8 462 aaKnown RBP19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 BAIAP2Q9UQB8 552 aa19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 GPR52Q9Y2T5 361 aa19.35■□□□□ 0.69
PDLIM3-203ENST00000284771 PCNX1Q96RV3 2341 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 IDH3BO43837 385 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 PRKYO43930 277 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 GLI4P10075 376 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 GRK5P34947 590 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 SELENOPP49908 381 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 ESPL1Q14674 2120 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 GPR139Q6DWJ6 353 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 GTF2IRD2BQ6EKJ0 949 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 MYO7BQ6PIF6 2116 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 NUFIP2Q7Z417 695 aaKnown RBP19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 GTF2IRD2Q86UP8 949 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 OR52E2Q8NGJ4 325 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 HDAC2Q92769 488 aaKnown RBP19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 GMPPAQ96IJ6 420 aaPredicted RBP19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 NMNAT3Q96T66 252 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 MRPL13Q9BYD1 178 aaKnown RBP19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 CMC2Q9NRP2 79 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 OSGIN2Q9Y236 505 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 FAM208BQ5VWN6 2430 aa19.34■□□□□ 0.69
PDLIM3-203ENST00000284771 H7C1C5 153 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 AGTR1P30556 359 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 TIMP3P35625 211 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 DAP3P51398 398 aaKnown RBP19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 LCN6P62502 163 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 CAMK2DQ13557 499 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 SNAPC1Q16533 368 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 ZNF691Q5VV52 312 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 MCEMP1Q8IX19 187 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 NPEPL1Q8NDH3 523 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 SDR9C7Q8NEX9 313 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 OR6X1Q8NH79 312 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 FAM81AQ8TBF8 368 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 TM9SF2Q99805 663 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 NDEL1Q9GZM8 345 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 ZNF226Q9NYT6 803 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 RAB26Q9ULW5 256 aa19.33■□□□□ 0.69
PDLIM3-203ENST00000284771 GPR171O14626 319 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 ARHGEF9O43307 516 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 SS18L1O75177 396 aaPredicted RBP19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 TRMUO75648 421 aaKnown RBP19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 CA7P43166 264 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 KIR2DL2P43627 348 aaPredicted RBP19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 HSPA13P48723 471 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 ISL1P61371 349 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 KRR1Q13601 381 aaKnown RBP19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 ENTHD1Q8IYW4 607 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 TMEM123Q8N131 208 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 TCEANCQ8N8B7 351 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 CYB561A3Q8NBI2 242 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 TMEM45BQ96B21 275 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 SLC25A44Q96H78 314 aaPredicted RBP19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 OR2M2Q96R28 347 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 IL4I1Q96RQ9 567 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 KCNK17Q96T54 332 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 GP6Q9HCN6 339 aa19.33■□□□□ 0.68
PDLIM3-203ENST00000284771 TRGV8A0A0C4DH27 118 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 OR6C68A6NDL8 312 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 HMGN1P05114 100 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 STSP08842 583 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 PGA4P0DJD7 388 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 PGA3P0DJD8 388 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 ACADSP16219 412 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 GABRB1P18505 474 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 CEACAM8P31997 349 aaPredicted RBP19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 PCYT1AP49585 367 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 LGALS3BPQ08380 585 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 PMPCAQ10713 525 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 CRMP1Q14194 572 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 NIPAL3Q6P499 406 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 CASP12Q6UXS9 341 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 BCDIN3DQ7Z5W3 292 aaKnown RBP19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 SYT14Q8NB59 555 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 PTP4A1Q93096 173 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 HCAR1Q9BXC0 346 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 GLRX2Q9NS18 164 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 RNF6Q9Y252 685 aa19.32■□□□□ 0.68
PDLIM3-203ENST00000284771 NOSIPQ9Y314 301 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms