RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 NAGSQ8N159 534 aa8.12□□□□□ -1.11
NIPBL-201ENST00000282516 DNAJC5GQ8N7S2 189 aa8.12□□□□□ -1.11
NIPBL-201ENST00000282516 OR5B3Q8NH48 314 aa8.12□□□□□ -1.11
NIPBL-201ENST00000282516 AKR1E2Q96JD6 320 aa8.12□□□□□ -1.11
NIPBL-201ENST00000282516 ADOQ96SZ5 270 aa8.12□□□□□ -1.11
NIPBL-201ENST00000282516 UTP23Q9BRU9 249 aaKnown RBP8.12□□□□□ -1.11
NIPBL-201ENST00000282516 CKAP5Q14008 2032 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 KIR2DS5A0A0G2JLQ3 304 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 A0A0G2JNG1 304 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 SERTM2A0A1B0GWG4 89 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM200CA6NKL6 621 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 KIR2DS3K7RE56 304 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 MEOX1P50221 254 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 EPHA5P54756 1037 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 SH3BP2P78314 561 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 KIR2DS5Q14953 304 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 MTMR14Q8NCE2 650 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 GPR26Q8NDV2 337 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 TRAPPC2P0DI81 140 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 TRAPPC2BP0DI82 140 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 GDNFP39905 211 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 OR1Q1Q15612 314 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 DEFB110Q30KQ9 67 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 GDPD3Q7L5L3 318 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF596Q8TC21 504 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 DOK4Q8TEW6 326 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 LYSMD1Q96S90 227 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 RNF39Q9H2S5 420 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 PLEKHF2Q9H8W4 249 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 GALNT9Q9HCQ5 603 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 OSGIN1Q9UJX0 560 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 RAB22AQ9UL26 194 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 PIGLQ9Y2B2 252 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 CLDN24A6NM45 220 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 M0QZ24 198 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 DCTP40126 519 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 TBC1D28Q2M2D7 210 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 C9orf152Q5JTZ5 239 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 HENMT1Q5T8I9 393 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 SLC35D2Q76EJ3 337 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 FCRLAQ7L513 359 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 LGI3Q8N145 548 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 OR6K3Q8NGY3 331 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 RBPMSQ93062 196 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 FUBP1Q96AE4 644 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF845Q96IR2 970 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 IGSF5Q9NSI5 407 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 CADP27708 2225 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 PLRG1O43660 514 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 AREGP15514 252 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 FECHP22830 423 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 ENDOGQ14249 297 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF239Q16600 458 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 HYAL4Q2M3T9 481 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 KHSRPQ92945 711 aaKnown RBP eCLIP8.11□□□□□ -1.111e-6■■■■□ 21.3
NIPBL-201ENST00000282516 MBOAT4Q96T53 435 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 FAM103A1Q9BTL3 118 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 CPEB1Q9BZB8 566 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 ULBP3Q9BZM4 244 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 TAF9BQ9HBM6 251 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 UGT2A1Q9Y4X1 527 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 H3BQ06 376 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 BLVRBP30043 206 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 GNB1P62873 340 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM176BQ3YBM2 270 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 Q499Y3 187 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 PRSS35Q8N3Z0 413 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 HSD17B8Q92506 261 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 NOX4Q9NPH5 578 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 OR2M3Q8NG83 312 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 SCARB1Q8WTV0 552 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 AK3Q9UIJ7 227 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 MOKQ9UQ07 419 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 KDM4EB2RXH2 506 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 DUSP1P28562 367 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 REEP5Q00765 189 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 HTR4Q13639 388 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 VHLLQ6RSH7 139 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 Q6ZTK2 550 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 RNF113BQ8IZP6 322 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 TSLPQ969D9 159 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 WDR83Q9BRX9 315 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 ZFC3H1O60293 1989 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 PDGFBP01127 241 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 TNFRSF1BP20333 461 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 EIF1P41567 113 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 VASPP50552 380 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 PET117Q6UWS5 81 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 OR51A2Q8NGJ7 313 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 H1FXQ92522 213 aaKnown RBP8.11□□□□□ -1.11
NIPBL-201ENST00000282516 RAB6CQ9H0N0 254 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 EPHX3Q9H6B9 360 aa8.11□□□□□ -1.11
NIPBL-201ENST00000282516 GPR171O14626 319 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 HSF1Q00613 529 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 APH1BQ8WW43 257 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 VRTNQ9H8Y1 702 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 FBXL2Q9UKC9 423 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM131LA2VDJ0 1609 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms