RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 METTL7AQ9H8H3 244 aa18.88■□□□□ 0.61
YBX3-202ENST00000279550 SRA1Q9HD15 236 aaKnown RBP18.88■□□□□ 0.61
YBX3-202ENST00000279550 INIPQ9NRY2 104 aa18.88■□□□□ 0.61
YBX3-202ENST00000279550 PPP4R1LQ9P1A2 415 aa18.88■□□□□ 0.61
YBX3-202ENST00000279550 PLPP2O43688 288 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 UPK1BO75841 260 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 PLGP00747 810 aaPredicted RBP18.87■□□□□ 0.61
YBX3-202ENST00000279550 SPINK2P20155 84 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 GTF2E2P29084 291 aaKnown RBP18.87■□□□□ 0.61
YBX3-202ENST00000279550 ACVR1BP36896 505 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 PSMD7P51665 324 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 MLF1P58340 268 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 DMKNQ6E0U4 476 aaPredicted RBP18.87■□□□□ 0.61
YBX3-202ENST00000279550 H3F3CQ6NXT2 135 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 ZNF417Q8TAU3 575 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 ZNF587Q96SQ5 575 aaPredicted RBP18.87■□□□□ 0.61
YBX3-202ENST00000279550 PPIL3Q9H2H8 161 aaKnown RBP18.87■□□□□ 0.61
YBX3-202ENST00000279550 MARCH7Q9H992 704 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 DAPK2Q9UIK4 370 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 KLHDC2Q9Y2U9 406 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 WIF1Q9Y5W5 379 aa18.87■□□□□ 0.61
YBX3-202ENST00000279550 IGLV3-32A0A0A0MS00 114 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 PLPP3O14495 311 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 CASKO14936 926 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 TBX1O43435 398 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 TAS2R43P59537 309 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 RUNX1T1Q06455 604 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 SRSF6Q13247 344 aaKnown RBP18.86■□□□□ 0.61
YBX3-202ENST00000279550 SLC6A19Q695T7 634 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 OR6V1Q8N148 313 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 SYS1Q8N2H4 156 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 NEIL3Q8TAT5 605 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 ZNF519Q8TB69 540 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 ABTB1Q969K4 478 aaPredicted RBP18.86■□□□□ 0.61
YBX3-202ENST00000279550 ARL5BQ96KC2 179 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 COX4I2Q96KJ9 171 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 PGLYRP3Q96LB9 341 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 SDHCQ99643 169 aaPredicted RBP18.86■□□□□ 0.61
YBX3-202ENST00000279550 SCNM1Q9BWG6 230 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 MROQ9BYG7 248 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 RNF32Q9H0A6 362 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 ABCB10Q9NRK6 738 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 WASF3Q9UPY6 502 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 POLHQ9Y253 713 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 RGS5O15539 181 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 ARHGEF9O43307 516 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 EFNA2O43921 213 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 GALP22466 123 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 CASP3P42574 277 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 SSR4P51571 173 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 CLN3Q13286 438 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 ACKR1Q16570 336 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 OPN5Q6U736 354 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 POC1BQ8TC44 478 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 THOC3Q96J01 351 aaKnown RBP18.86■□□□□ 0.61
YBX3-202ENST00000279550 CEP19Q96LK0 163 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 FER1L6-AS2Q96M78 137 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 POLE4Q9NR33 117 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 FAIMQ9NVQ4 179 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 CMAHPQ9Y471 501 aa18.86■□□□□ 0.61
YBX3-202ENST00000279550 TVP23AA6NH52 213 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 ETV2O00321 342 aaPredicted RBP18.85■□□□□ 0.61
YBX3-202ENST00000279550 OGG1O15527 345 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 GPANK1O95872 356 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 RENP00797 406 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 OCM2P0CE71 109 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 OCMP0CE72 109 aaPredicted RBP18.85■□□□□ 0.61
YBX3-202ENST00000279550 CD53P19397 219 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 AHCYP23526 432 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 ACTA2P62736 377 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 ACTG2P63267 376 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 AIMP2Q13155 320 aaKnown RBP18.85■□□□□ 0.61
YBX3-202ENST00000279550 OXA1LQ15070 435 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 C11orf91Q3C1V1 193 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 FAM27D1Q5T7N8 215 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 ATP1A1-AS1Q5TC04 95 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 LYSMD2Q8IV50 215 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 TIGD4Q8IY51 512 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 PM20D2Q8IYS1 436 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 OR2M3Q8NG83 312 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 OR13C5Q8NGS8 318 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 WDFY2Q96P53 400 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 SLC30A2Q9BRI3 323 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 SYT4Q9H2B2 425 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 ABCB9Q9NP78 766 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 RYDENQ9NUL5 291 aaKnown RBP18.85■□□□□ 0.61
YBX3-202ENST00000279550 ACOXLQ9NUZ1 547 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 GNG8Q9UK08 70 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 MOKQ9UQ07 419 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 PCDHGB7Q9Y5F8 929 aa18.85■□□□□ 0.61
YBX3-202ENST00000279550 SLC35F4A4IF30 521 aa18.84■□□□□ 0.61
YBX3-202ENST00000279550 TCEA1P23193 301 aaKnown RBP18.84■□□□□ 0.61
YBX3-202ENST00000279550 MSX1P28360 303 aa18.84■□□□□ 0.61
YBX3-202ENST00000279550 PSMB10P40306 273 aa18.84■□□□□ 0.61
YBX3-202ENST00000279550 APOBEC1P41238 236 aaKnown RBP18.84■□□□□ 0.61
YBX3-202ENST00000279550 RPL27P61353 136 aaKnown RBP18.84■□□□□ 0.61
YBX3-202ENST00000279550 FOXK1P85037 733 aa18.84■□□□□ 0.61
YBX3-202ENST00000279550 PLPPR5Q32ZL2 321 aa18.84■□□□□ 0.61
YBX3-202ENST00000279550 SPANXN2Q5MJ10 180 aa18.84■□□□□ 0.61
YBX3-202ENST00000279550 ZNF684Q5T5D7 378 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms