RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SCNM1Q9BWG6 230 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 SLITRK2Q9H156 845 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 C20orf85Q9H1P6 137 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 FBXL3Q9UKT7 428 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 COPS3Q9UNS2 423 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 HIF3AQ9Y2N7 669 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 ADAM18Q9Y3Q7 739 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 SPTY2D1-AS1A0A0U1RR47 76 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 A0A1B0GUH1 482 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 HSPB2A8KAH6 182 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 PIN1P1O15428 100 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 ZNF432O94892 652 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 IFNA7P01567 189 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 CELA2BP08218 269 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-201ENST00000277198 GIMD1P0DJR0 217 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 CT45A8P0DMV1 189 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 CT45A9P0DMV2 189 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 M6PRP20645 277 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 C4BPBP20851 252 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 CCR6P51684 374 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 AP2S1P53680 142 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-201ENST00000277198 HSPB2Q16082 182 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 CT45A2Q5DJT8 189 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 EMC4Q5J8M3 183 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 SEZ6L2Q6UXD5 910 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 NPSR1Q6W5P4 371 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 SLC16A9Q7RTY1 509 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 SYT9Q86SS6 491 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 OR6V1Q8N148 313 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 SLC37A2Q8TED4 501 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 FCAMRQ8WWV6 532 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 DGAT2Q96PD7 388 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 DERL3Q96Q80 235 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 HEXA-AS1Q9H8Q6 139 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 DLL4Q9NR61 685 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 PRODH2Q9UF12 536 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 CLEC4AQ9UMR7 237 aa11.75□□□□□ -0.53
C9orf3-201ENST00000277198 A0A0B4J203 849 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 LEUTXA8MZ59 168 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 SSNA1O43805 119 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 SELENOFO60613 162 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 PIAS2O75928 621 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 KRT33AO76009 404 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 TXNDC12O95881 172 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 CD14P08571 375 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 CPN1P15169 458 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 DNASE1P24855 282 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 DBPQ10586 325 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 FAM53BQ14153 422 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 Q499Y3 187 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 KLHL26Q53HC5 615 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 OLFML2AQ68BL7 652 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 WBP2NLQ6ICG8 309 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 LRRN1Q6UXK5 716 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 LINGO2Q7L985 606 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 FAM220AQ7Z4H9 259 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 MCATQ8IVS2 390 aaKnown RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 SHISA5Q8N114 240 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 PIAS4Q8N2W9 510 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 OR11H4Q8NGC9 324 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 OR51L1Q8NGJ5 315 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 THRSPQ92748 146 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 HAVCR1Q96D42 359 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 NXPE2Q96DL1 559 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 UTP23Q9BRU9 249 aaKnown RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 ALG12Q9BV10 488 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 ZNF436Q9C0F3 470 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 CLEC4MQ9H2X3 399 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 HRASLSQ9HDD0 168 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 EXOSC3Q9NQT5 275 aaKnown RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 PRTFDC1Q9NRG1 225 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 LAMA5O15230 3695 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 A0A1W2PQ72 361 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 SHOXO15266 292 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 MAGEB4O15481 346 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 SIGLEC6O43699 453 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 ZFPL1O95159 310 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 MT-ND4P03905 459 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 C1orf61Q13536 156 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 GLRX5Q86SX6 157 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 JAZF1Q86VZ6 243 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 TIGD4Q8IY51 512 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 SPICQ8N5J4 248 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 BCORP1Q8N888 145 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 C19orf47Q8N9M1 422 aaKnown RBP11.74□□□□□ -0.53
C9orf3-201ENST00000277198 OR11G2Q8NGC1 345 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 OR6C4Q8NGE1 309 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 OR6K6Q8NGW6 343 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 PATE1Q8WXA2 126 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 SLC25A38Q96DW6 304 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 GFI1Q99684 422 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 C12orf10Q9HB07 376 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 FAM60AQ9NP50 221 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 ANKRD10Q9NXR5 420 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 OR10H1Q9Y4A9 318 aa11.74□□□□□ -0.53
C9orf3-201ENST00000277198 USP24Q9UPU5 2620 aa11.73□□□□□ -0.53
C9orf3-201ENST00000277198 ANKRD20A5PA0PJZ0 165 aa11.73□□□□□ -0.53
C9orf3-201ENST00000277198 TUBAL3A6NHL2 446 aa11.73□□□□□ -0.53
C9orf3-201ENST00000277198 ELOA3DA6NLF2 546 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms