RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CDC14BO60729 498 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 OR2C1O95371 312 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 CH25HO95992 272 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 TRBC1P01850 177 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 ASGR1P07306 291 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 EPORP19235 508 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 TACR3P29371 465 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 ACVR1BP36896 505 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 SERPINF1P36955 418 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 PSEN2P49810 448 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 RPS23P62266 143 aaKnown RBP8.44□□□□□ -1.06
PDGFC-201ENST00000274071 NAAAQ02083 359 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 PTSQ03393 145 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 PIN1Q13526 163 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-201ENST00000274071 FAM189A2Q15884 450 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF674Q2M3X9 581 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 UBXN11Q5T124 520 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 CPTPQ5TA50 214 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 ULK3Q6PHR2 472 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 ENPP7Q6UWV6 458 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 FAM129CQ86XR2 697 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 FRMD1Q8N878 549 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM40Q8WWA1 233 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 SMPDL3BQ92485 455 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM38AQ9H6F2 299 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 SLC23A2Q9UGH3 650 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 SHPKQ9UHJ6 478 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 SLCO1B1Q9Y6L6 691 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM235A6NFC5 223 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TGOLN2O43493 480 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 OR1F1O43749 312 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF888P0CJ79 500 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TYMPP19971 482 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 LPOP22079 712 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TLX1P31314 330 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 CEACAM8P31997 349 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 AQP2P41181 271 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 RPS15P62841 145 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 NKX6-1P78426 367 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SRSF4Q08170 494 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SRSF5Q13243 272 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZBTB6Q15916 424 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 CLEC12AQ5QGZ9 265 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF697Q5TEC3 545 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 MARC1Q5VT66 337 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 C17orf99Q6UX52 265 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 MRGPREQ86SM8 312 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF283Q8N7M2 679 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 OR51G2Q8NGK0 314 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 C1orf216Q8TAB5 229 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ARRDC2Q8TBH0 407 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 HPSE2Q8WWQ2 592 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 OR5B2Q96R09 309 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TBX5Q99593 518 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 FAM83CQ9BQN1 747 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM121BQ9BXQ6 578 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TRIM36Q9NQ86 728 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 H2AFY2Q9P0M6 372 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF282Q9UDV7 671 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 PIN4Q9Y237 131 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TDRD15B5MCY1 1934 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM269A0A1B0GVZ9 245 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 DRGXA6NNA5 263 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF705GA8MUZ8 300 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 PRAMEF26H0Y7S4 382 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 J3QRE1 110 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ACOT7O00154 380 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 CCSO14618 274 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 DVL1O14640 695 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 FLRT2O43155 660 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF821O75541 412 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 RPLP2P05387 115 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 GDI1P31150 447 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TTPAP49638 278 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 EIF5AP63241 154 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 HBA1P69905 142 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 RHEBQ15382 184 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 HENMT1Q5T8I9 393 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 KHDRBS2Q5VWX1 349 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF529Q6P280 563 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TMPPEQ6ZT21 453 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 FCRLAQ7L513 359 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SLC16A14Q7RTX9 510 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TEX19Q8NA77 164 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 B3GALNT2Q8NCR0 500 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SLC24A4Q8NFF2 622 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 GPR32P1Q8NGA4 272 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 OR4D11Q8NGI4 311 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TERB2Q8NHR7 220 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SLC25A43Q8WUT9 341 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ADGRG7Q96K78 797 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ALKBH3Q96Q83 286 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ACTR3CQ9C0K3 210 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SYT4Q9H2B2 425 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 POFUT1Q9H488 388 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 GSX1Q9H4S2 264 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 EXO5Q9H790 373 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SAGE1Q9NXZ1 904 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SEMA5BQ9P283 1151 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 FBXO7Q9Y3I1 522 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms