RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 SPARCP09486 303 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ERGP11308 486 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 HTR2AP28223 471 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 PCBP3P57721 371 aaKnown RBP12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SKP1P63208 163 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 MEP1BQ16820 701 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ZNF527Q8NB42 609 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 OR52I1Q8NGK6 324 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ACOT11Q8WXI4 607 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DIO2Q92813 273 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 OPALINQ96PE5 141 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DPAGT1Q9H3H5 408 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SEMA6CQ9H3T2 930 aa12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ELF5Q9UKW6 265 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF11A-201ENST00000269485 OR5K4A6NMS3 321 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 KRBOX1C9JBD0 128 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 CHP2O43745 196 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LPLP06858 475 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 AFF3P51826 1226 aaKnown RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ETFDHQ16134 617 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 C9orf152Q5JTZ5 239 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 FAM74A1Q5RGS3 127 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 HES5Q5TA89 166 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 PLXDC2Q6UX71 529 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SLC36A4Q6YBV0 504 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 RFLNBQ8N5W9 214 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SAMD12Q8N8I0 201 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 GOT1L1Q8NHS2 421 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 WDR77Q9BQA1 342 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 C7orf50Q9BRJ6 194 aaKnown RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 JAM3Q9BX67 310 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ELL3Q9HB65 397 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 KRCC1Q9NPI7 259 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LIPT1Q9Y234 373 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 RALGAPA1Q6GYQ0 2036 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 KDM4EB2RXH2 506 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TGFBR3LH3BV60 316 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LALBAP00709 142 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 IGKV1D-16P01601 117 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TPOP07202 933 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 CELA2AP08217 269 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 OR8G3PP0DMU2 310 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SHC1P29353 583 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 OR10A3P58181 314 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 FOXK1P85037 733 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 RSPO4Q2I0M5 234 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 CLLU1Q5K131 121 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LRRC69Q6ZNQ3 347 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ADGRG3Q86Y34 549 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 C12orf45Q8N5I9 185 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DENND6BQ8NEG7 585 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 OR1L3Q8NH93 324 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 C9orf43Q8TAL5 461 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 NPRL2Q8WTW4 380 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ADAD1Q96M93 576 aaKnown RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 PINK1Q9BXM7 581 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 PITHD1Q9GZP4 211 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ZMAT3Q9HA38 289 aaKnown RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 A4GALTQ9NPC4 353 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 MRTO4Q9UKD2 239 aaKnown RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 R4GN57 208 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 THADAQ6YHU6 1953 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 METTL12A8MUP2 240 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 RAB36O95755 333 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 IGHV3-9P01782 118 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SLC2A1P11166 492 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TACR3P29371 465 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 CD226Q15762 336 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TIGD3Q6B0B8 471 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SLC25A25Q6KCM7 469 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 PDZD9Q8IXQ8 264 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DNAAF1Q8NEP3 725 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 GPBAR1Q8TDU6 330 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ALG8Q9BVK2 526 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 METTL7AQ9H8H3 244 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 CDV3Q9UKY7 258 aaKnown RBP12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 STUB1Q9UNE7 303 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 KLK4Q9Y5K2 254 aa12.92□□□□□ -0.34
TNFRSF11A-201ENST00000269485 E9PI62 339 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ICOSLGO75144 302 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 RECKO95980 971 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 HMGN1P05114 100 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 PRKXP51817 358 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SRYQ05066 204 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 FAM198BQ6UWH4 519 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SLC29A4Q7RTT9 530 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LINC00346Q8IVM7 164 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TOMM5Q8N4H5 51 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SIRT6Q8N6T7 355 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 RHBDD1Q8TEB9 315 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ZNF566Q969W8 418 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ZNF681Q96N22 645 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 FUZQ9BT04 418 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SYT4Q9H2B2 425 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ZNF69Q9UC07 566 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 PCOLCE2Q9UKZ9 415 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 A0A087WV48 116 aa12.91□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TMEM72A0PK05 275 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms