RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 POU3F2P20265 443 aaPredicted RBP11.33□□□□□ -0.6
SGCE-201ENST00000265735 GRK5P34947 590 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 ZNF41P51814 821 aaPredicted RBP11.33□□□□□ -0.6
SGCE-201ENST00000265735 SUCLG1P53597 346 aaKnown RBP11.33□□□□□ -0.6
SGCE-201ENST00000265735 SRYQ05066 204 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 SKP2Q13309 424 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 SLC25A53Q5H9E4 307 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 POMZP3Q6PJE2 187 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 LINC00114Q6XXX2 140 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 NAXEQ8NCW5 288 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 OR4Q3Q8NH05 313 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 DOCK7Q96N67 2140 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 TRIB1Q96RU8 372 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 C20orf141Q9NUB4 165 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 MRPS18AQ9NVS2 196 aaKnown RBP11.33□□□□□ -0.6
SGCE-201ENST00000265735 CLCF1Q9UBD9 225 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 HCFC1P51610 2035 aa11.33□□□□□ -0.6
SGCE-201ENST00000265735 HTR3EA5X5Y0 456 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 H3BML4 177 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 ADAM11O75078 769 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 RAB36O95755 333 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 PRKCAP17252 672 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 PTNP21246 168 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 COL8A1P27658 744 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 GRNP28799 593 aaKnown RBP11.32□□□□□ -0.6
SGCE-201ENST00000265735 TGFBR2P37173 567 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 EIF1P41567 113 aaKnown RBP11.32□□□□□ -0.6
SGCE-201ENST00000265735 CLDN20P56880 219 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 RAC1P63000 192 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 RAB40BQ12829 278 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 TOMM34Q15785 309 aaPredicted RBP11.32□□□□□ -0.6
SGCE-201ENST00000265735 HIST2H2BCQ6DN03 193 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 SMARCD3Q6STE5 483 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 BCDIN3DQ7Z5W3 292 aaKnown RBP11.32□□□□□ -0.6
SGCE-201ENST00000265735 GGNQ86UU5 652 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 LIX1LQ8IVB5 337 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 WNT2BQ93097 391 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 MEPEQ9NQ76 525 aaPredicted RBP11.32□□□□□ -0.6
SGCE-201ENST00000265735 DIMT1Q9UNQ2 313 aaKnown RBP11.32□□□□□ -0.6
SGCE-201ENST00000265735 BAIAP2Q9UQB8 552 aa11.32□□□□□ -0.6
SGCE-201ENST00000265735 FLNBO75369 2602 aaKnown RBP11.31□□□□□ -0.6
SGCE-201ENST00000265735 A0A087WUJ7 227 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 HSPB2A8KAH6 182 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 PRSS44E7EML9 344 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 H0YC42 278 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 M0R082 166 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 M0R3G1 203 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 EFNA2O43921 213 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 IL2RAP01589 272 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 PNMTP11086 282 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 ZNF182P17025 639 aaPredicted RBP11.31□□□□□ -0.6
SGCE-201ENST00000265735 LIPAP38571 399 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 SLC6A8P48029 635 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 DLX5P56178 289 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 TFF3Q07654 80 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.31□□□□□ -0.6
SGCE-201ENST00000265735 C1DQ13901 141 aaKnown RBP11.31□□□□□ -0.6
SGCE-201ENST00000265735 CBFBQ13951 182 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 SPCS2Q15005 226 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 MED22Q15528 200 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 HSPB2Q16082 182 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 ARMCX4Q5H9R4 360 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 SP5Q6BEB4 398 aaPredicted RBP11.31□□□□□ -0.6
SGCE-201ENST00000265735 WBP2NLQ6ICG8 309 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 SLC46A3Q7Z3Q1 461 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 MEIOBQ8N635 442 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 C9orf106Q8NAJ2 232 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 ACBD4Q8NC06 268 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 OR13C2Q8NGS9 318 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 RNFT2Q96EX2 444 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 MRGPRX4Q96LA9 322 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 FN3KQ9H479 309 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 SLC24A3Q9HC58 644 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 FGF20Q9NP95 211 aaPredicted RBP11.31□□□□□ -0.6
SGCE-201ENST00000265735 CHST11Q9NPF2 352 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 CHCHD3Q9NX63 227 aaKnown RBP11.31□□□□□ -0.6
SGCE-201ENST00000265735 H2AFY2Q9P0M6 372 aaPredicted RBP11.31□□□□□ -0.6
SGCE-201ENST00000265735 ZNF629Q9UEG4 869 aaPredicted RBP11.31□□□□□ -0.6
SGCE-201ENST00000265735 SIGLEC7Q9Y286 467 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 MED12LQ86YW9 2145 aa11.31□□□□□ -0.6
SGCE-201ENST00000265735 MYL12BO14950 172 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 NUDT14O95848 222 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 CH25HO95992 272 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 MYL12AP19105 171 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 IL11P20809 199 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 NR4A1P22736 598 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 MTNR1AP48039 350 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 CDH11P55287 796 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 FOXF1Q12946 379 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 AQP6Q13520 282 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 QPRTQ15274 297 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 NXNL2Q5VZ03 156 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 OAFQ86UD1 273 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 GID4Q8IVV7 300 aa11.3□□□□□ -0.6
SGCE-201ENST00000265735 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms