RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TSEN15Q8WW01 171 aaKnown RBP8.31□□□□□ -1.08
MSH4-201ENST00000263187 CTHRC1Q96CG8 243 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 VSTM2LQ96N03 204 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 LINC00052Q96N35 136 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 DGAT2Q96PD7 388 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 RTN4RQ9BZR6 473 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 LYRM4Q9HD34 91 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.31□□□□□ -1.08
MSH4-201ENST00000263187 C14orf105Q9NVL8 296 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 HAO2Q9NYQ3 351 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 SERTAD3Q9UJW9 196 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 TMEM184BQ9Y519 407 aaPredicted RBP8.31□□□□□ -1.08
MSH4-201ENST00000263187 MAB21L2Q9Y586 359 aa8.31□□□□□ -1.08
MSH4-201ENST00000263187 MUC22E2RYF6 1773 aaPredicted RBP8.31□□□□□ -1.08
MSH4-201ENST00000263187 IGKV1D-42A0A075B6H8 117 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 TCRBV21S2A2A0A5A6 115 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 SERINC4A6NH21 518 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 SLC35E2P0CK97 266 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 VSIG10L2P0DP72 767 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 ZNF35P13682 527 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 CTSEP14091 401 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 MAP2K6P52564 334 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 HHEXQ03014 270 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 LTBQ06643 244 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 TOMM34Q15785 309 aaPredicted RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 ETFDHQ16134 617 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 BEX5Q5H9J7 111 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 TMEM205Q6UW68 189 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 OVCH1Q7RTY7 1134 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 MAP3K3Q99759 626 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 ARL6Q9H0F7 186 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 OR10A5Q9H207 317 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 COPZ2Q9P299 210 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 GRHPRQ9UBQ7 328 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 KCNN3Q9UGI6 736 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 KCNG2Q9UJ96 466 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 ATXN7L1Q9ULK2 861 aaPredicted RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 MOKQ9UQ07 419 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 YBX2Q9Y2T7 364 aaKnown RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 EML5Q05BV3 1969 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 A0A087WUJ7 227 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 A0A0J9YY10 115 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 A6NCN8 305 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 C2orf72A6NCS6 295 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 SPDEFO95238 335 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 GTF2F2P13984 249 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 HNRNPA2B1P22626 353 aaKnown RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 OR1D4P47884 311 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 FNTBP49356 437 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 ATXN7L3Q14CW9 347 aaPredicted RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 DMRTC1Q5HYR2 192 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 LINC01590Q5TEZ4 76 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 DPY19L2P2Q6ZN68 376 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 MCATQ8IVS2 390 aaKnown RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 POMGNT2Q8NAT1 580 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 RELL2Q8NC24 303 aaPredicted RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 OR51S1Q8NGJ8 323 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 STK35Q8TDR2 534 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 ZNF426Q9BUY5 554 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 PRTFDC1Q9NRG1 225 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 PIPOXQ9P0Z9 390 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 ICAM5Q9UMF0 924 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 LINC00862A6NCI5 91 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 GABARAPH6UMI1 98 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 M0QYG6 137 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 TNFSF14O43557 240 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 ITGA10O75578 1167 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 MAP3K8P41279 467 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 C4orf46Q504U0 113 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 SHISA6Q6ZSJ9 500 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 SYS1Q8N2H4 156 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 TNFAIP8L1Q8WVP5 186 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 RNF166Q96A37 237 aaPredicted RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 MNTQ99583 582 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 LPAR4Q99677 370 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 GSX2Q9BZM3 304 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 PRDM9Q9NQV7 894 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 SOHLH2Q9NX45 425 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 CDV3Q9UKY7 258 aaKnown RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 FARSAQ9Y285 508 aaKnown RBP8.3□□□□□ -1.08
MSH4-201ENST00000263187 ZNF337Q9Y3M9 751 aa8.3□□□□□ -1.08
MSH4-201ENST00000263187 UNC13CQ8NB66 2214 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 KCNAB3O43448 404 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 CREBL2O60519 120 aaPredicted RBP8.29□□□□□ -1.08
MSH4-201ENST00000263187 GLCEO94923 617 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 ACSM4P0C7M7 580 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 GPR143P51810 404 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 H2BFSP57053 126 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 RAB38P57729 211 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 RPL18Q07020 188 aaKnown RBP8.29□□□□□ -1.08
MSH4-201ENST00000263187 NKAIN2Q5VXU1 208 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 C3P1Q6ZMU1 363 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 RTL10Q7L3V2 364 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 ZNF627Q7L945 461 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 ZNF550Q7Z398 422 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 DND1Q8IYX4 353 aaKnown RBP8.29□□□□□ -1.08
MSH4-201ENST00000263187 OR4C16Q8NGL9 310 aa8.29□□□□□ -1.08
MSH4-201ENST00000263187 SLITRK2Q9H156 845 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms