RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 RAMP1O60894 148 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 CRYABP02511 175 aaKnown RBP24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 ZNF708P17019 499 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 DDOSTP39656 456 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 MAP2K6P52564 334 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 KLRB1Q12918 225 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 IQCF1Q8N6M8 205 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 MFSD8Q8NHS3 518 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 SMG1Q96Q15 3661 aaKnown RBP24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 H3BN98 237 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 BMP4P12644 408 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 PRKACAP17612 351 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 AQP2P41181 271 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 HBMQ6B0K9 141 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 ZNF620Q6ZNG0 422 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 FGD2Q7Z6J4 655 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 TMEM99Q8N816 258 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 OR10D3Q8NH80 312 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 FANK1Q8TC84 345 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 MIB2Q96AX9 1013 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 SAMD8Q96LT4 415 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 UCN2Q96RP3 112 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 TMEM246Q9BRR3 403 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 TAPBPLQ9BX59 468 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 FKRPQ9H9S5 495 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 HDGFL3Q9Y3E1 203 aa24.61■■□□□ 1.53
SMARCD3-201ENST00000262188 PTP4A3O75365 173 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 GNAO1P09471 354 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 ZFP69Q49AA0 526 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 ZNF324BQ6AW86 544 aaPredicted RBP24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 PRSS48Q7RTY5 328 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 CCDC103Q8IW40 242 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 OSTF1Q92882 214 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 OR52D1Q9H346 318 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 PLSCR2Q9NRY7 297 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 OR2T1O43869 369 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 HCN1O60741 890 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 CLIC3O95833 236 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 OSMP13725 252 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 GABARAPL2P60520 117 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 XAF1Q6GPH4 301 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 C5orf46Q6UWT4 87 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 CD300LDQ6UXZ3 194 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 RASSF6Q6ZTQ3 369 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 MAMDC2Q7Z304 686 aaPredicted RBP24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 LYSMD2Q8IV50 215 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 SVOPQ8N4V2 548 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 LINC00469Q8N7U9 141 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 OR5M9Q8NGP3 310 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 OR2V1Q8NHB1 315 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 WDYHV1Q96HA8 205 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 CAMK2AQ9UQM7 478 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 ORC6Q9Y5N6 252 aa24.6■■□□□ 1.53
SMARCD3-201ENST00000262188 C11orf98E9PRG8 122 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 SERPINI2O75830 405 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 ACTL6AO96019 429 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 IGF2P01344 180 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 SLC9A3P48764 834 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 YIF1BQ5BJH7 314 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 ESPNLQ6ZVH7 1005 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 FAR1Q8WVX9 515 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 CYGBQ8WWM9 190 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 GPR137Q96N19 417 aa24.59■■□□□ 1.53
SMARCD3-201ENST00000262188 GJE1A6NN92 205 aa24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 LINC01387J3KSC0 135 aa24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 F13BP05160 661 aa24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 GSTM3P21266 225 aa24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 CLK1P49759 484 aaKnown RBP24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 CARD18P57730 90 aa24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 NPRL3Q12980 569 aa24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 LIPHQ8WWY8 451 aa24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 PAK1IP1Q9NWT1 392 aaPredicted RBP24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 TAS2R5Q9NYW4 299 aa24.58■■□□□ 1.53
SMARCD3-201ENST00000262188 A0A1B0GVC2 190 aa24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 KDM4EB2RXH2 506 aaPredicted RBP24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 MT-ATP6P00846 226 aa24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 GTF2E2P29084 291 aaKnown RBP24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 RPL18Q07020 188 aaKnown RBP24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 COX10Q12887 443 aa24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 SLC16A12Q6ZSM3 486 aa24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 OR5J2Q8NH18 312 aa24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 ROBO4Q8WZ75 1007 aa24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 ALKBH4Q9NXW9 302 aa24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 KLHL13Q9P2N7 655 aa24.58■■□□□ 1.52
SMARCD3-201ENST00000262188 TTLL8A6PVC2 850 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 MCIDASD6RGH6 385 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 TRIM77I1YAP6 450 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 M0R129 80 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 PMS2P2O95744 297 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 PLGP00747 810 aaPredicted RBP24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 HIST1H2ABP04908 130 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 ADORA3P0DMS8 318 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 FKBP2P26885 142 aaKnown RBP24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 CRISP1P54107 249 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 RPS4XP62701 263 aaKnown RBP24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 AQP6Q13520 282 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 ESCO2Q56NI9 601 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 ATAD3CQ5T2N8 411 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 FAM205BPQ63HN1 556 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 HIST3H2AQ7L7L0 130 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms