RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 FCRL6Q6DN72 434 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 PRR18Q8N4B5 295 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 OR2Y1Q8NGV0 311 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 CHPT1Q8WUD6 406 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 TIMM10BQ9Y5J6 103 aa12.75□□□□□ -0.37
CDH1-201ENST00000261769 BPNT1O95861 308 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 MMP11P24347 488 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 RIPPLY1Q0D2K3 151 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 PWWP2BQ6NUJ5 590 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.74□□□□□ -0.37
CDH1-201ENST00000261769 CPNE4Q96A23 557 aaPredicted RBP12.74□□□□□ -0.37
CDH1-201ENST00000261769 VRK1Q99986 396 aaPredicted RBP12.74□□□□□ -0.37
CDH1-201ENST00000261769 APMAPQ9HDC9 416 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 SEC61A1P61619 476 aaKnown RBP12.74□□□□□ -0.37
CDH1-201ENST00000261769 TBCEQ15813 527 aaPredicted RBP12.74□□□□□ -0.37
CDH1-201ENST00000261769 ZNF554Q86TJ5 538 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 INTS12Q96CB8 462 aaKnown RBP12.74□□□□□ -0.37
CDH1-201ENST00000261769 MAKP20794 623 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 NKG7Q16617 165 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 FCRLAQ7L513 359 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 KDM8Q8N371 416 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 STK35Q8TDR2 534 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 MIB2Q96AX9 1013 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 EID2BQ96D98 161 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 SLC25A18Q9H1K4 315 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 PCOLCE2Q9UKZ9 415 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 TRPM6Q9BX84 2022 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 BORCS7-ASMTA0A0B4J1R7 106 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 OR7C1O76099 320 aaPredicted RBP12.74□□□□□ -0.37
CDH1-201ENST00000261769 SERPINE2P07093 398 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 RFC3P40938 356 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 FAPQ12884 760 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 PPA1Q15181 289 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 GRK1Q15835 563 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 TPRA1Q86W33 373 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 LIPHQ8WWY8 451 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 WDR34Q96EX3 536 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 ATP23Q9Y6H3 246 aa12.74□□□□□ -0.37
CDH1-201ENST00000261769 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
CDH1-201ENST00000261769 MCRIP1C9JLW8 97 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 TNFRSF10AO00220 468 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ZNF806P0C7X5 589 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 PNLIPP16233 465 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 HTR1FP30939 366 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 THEM4Q5T1C6 240 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ARSKQ6UWY0 536 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 LINC00346Q8IVM7 164 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 GALNT11Q8NCW6 608 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 SIMC1Q8NDZ2 872 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 SPIN2AQ99865 258 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 SPIN2BQ9BPZ2 258 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 MAN2C1Q9NTJ4 1040 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ERVK13-1Q9NX77 482 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ASB4Q9Y574 426 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ATAD5Q96QE3 1844 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ANKUB1A6NFN9 424 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 SERPINA2P20848 420 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 CEBPGP53567 150 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 TMEM211Q6ICI0 200 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 PRICKLE2Q7Z3G6 844 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ANKRD37Q7Z713 158 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 D2HGDHQ8N465 521 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 OR13C9Q8NGT0 318 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 OR4K15Q8NH41 348 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 LRFN5Q96NI6 719 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 MED20Q9H944 212 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ACER3Q9NUN7 267 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 PLA2G3Q9NZ20 509 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 A0A087WUU8 490 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 TBX19O60806 448 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 PRAMEF4O60810 478 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 EMP3P54852 163 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 MEP1BQ16820 701 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 WFDC8Q8IUA0 241 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 NKAIN4Q8IVV8 208 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ARIH2OSQ8N7S6 290 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 POGLUT1Q8NBL1 392 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 HRASLS5Q96KN8 279 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 BEX2Q9BXY8 128 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 BEX1Q9HBH7 125 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 HRH3Q9Y5N1 445 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ATG2BQ96BY7 2078 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 QDPRP09417 244 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 BDKRB2P30411 391 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 DAPP51397 102 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ZNF511Q8NB15 262 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 ITFG2Q969R8 447 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 EMC6Q9BV81 110 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 SYNPO2LQ9H987 977 aa12.73□□□□□ -0.37
CDH1-201ENST00000261769 MYEF2Q9P2K5 600 aaKnown RBP12.73□□□□□ -0.37
CDH1-201ENST00000261769 IFNA5P01569 189 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 IGHV4-34P06331 123 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 CHDHQ8NE62 594 aaPredicted RBP12.72□□□□□ -0.37
CDH1-201ENST00000261769 CT55Q8WUE5 264 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 CACNG6Q9BXT2 260 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 OR11A1Q9GZK7 315 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms