RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 HIKESHIQ53FT3 197 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 HMBOX1Q6NT76 420 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 ZNF730Q6ZMV8 503 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 MBOAT2Q6ZWT7 520 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 SLC35D2Q76EJ3 337 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 RRM2BQ7LG56 351 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 MEX3DQ86XN8 651 aaKnown RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 NRMQ8IXM6 262 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 C20orf196Q8IYI0 205 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 CDK20Q8IZL9 346 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 RNF113BQ8IZP6 322 aaKnown RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 TMEM123Q8N131 208 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 GPR137CQ8N3F9 429 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 C1orf162Q8NEQ5 155 aaPredicted RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 OR1K1Q8NGR3 316 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 LILRB1Q8NHL6 650 aaPredicted RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 MOSPD2Q8NHP6 518 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 SLC7A13Q8TCU3 470 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 ACOT11Q8WXI4 607 aaPredicted RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 ZNF837Q96EG3 531 aaPredicted RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 BOD1Q96IK1 185 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 CLPTM1LQ96KA5 538 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 LRR1Q96L50 414 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 ADAD1Q96M93 576 aaKnown RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 ESRP2Q9H6T0 727 aaKnown RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 CRLF2Q9HC73 371 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 GPR35Q9HC97 309 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 SLC17A5Q9NRA2 495 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 CCM2LQ9NUG4 571 aaPredicted RBP7.47□□□□□ -1.21
TMEM258-201ENST00000257262 NPAP1Q9NZP6 1156 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 ACTR3BQ9P1U1 418 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 PLEKHA6Q9Y2H5 1048 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 SLC25A15Q9Y619 301 aa7.47□□□□□ -1.21
TMEM258-201ENST00000257262 RAI1Q7Z5J4 1906 aaPredicted RBP7.46□□□□□ -1.21
TMEM258-201ENST00000257262 A0A096LPE4 126 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 A0A1W2PPZ6 126 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 TCRBV5S2A0A599 114 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 PDE5AO76074 875 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 BCL10O95999 233 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 RAF1P04049 648 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 FABP3P05413 133 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 H1F0P07305 194 aaKnown RBP7.46□□□□□ -1.22
TMEM258-201ENST00000257262 CD3EP07766 207 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 SAGP10523 405 aaPredicted RBP7.46□□□□□ -1.22
TMEM258-201ENST00000257262 ITGA2P17301 1181 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 ATP6V1B2P21281 511 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 ZNF83P51522 516 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 PRPS1P60891 318 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 ARF1P84077 181 aaKnown RBP7.46□□□□□ -1.22
TMEM258-201ENST00000257262 BSPH1Q075Z2 132 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 KEAP1Q14145 624 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 ACKR1Q16570 336 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 TBRG1Q3YBR2 411 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 PODNL1Q6PEZ8 512 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 PAMR1Q6UXH9 720 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 ZNF704Q6ZNC4 412 aaPredicted RBP7.46□□□□□ -1.22
TMEM258-201ENST00000257262 DHFR2Q86XF0 187 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 C17orf78Q8N4C9 275 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 OR6N1Q8NGY5 312 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 OR52J3Q8NH60 311 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 OR51A7Q8NH64 312 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 OR6X1Q8NH79 312 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 BCL2L2Q92843 193 aaPredicted RBP7.46□□□□□ -1.22
TMEM258-201ENST00000257262 TMEM54Q969K7 222 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 MCUR1Q96AQ8 359 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 SLC7A6OSQ96CW6 309 aaPredicted RBP7.46□□□□□ -1.22
TMEM258-201ENST00000257262 TNFRSF13CQ96RJ3 184 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 SEPHS2Q99611 448 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 TMEM204Q9BSN7 226 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 THTPAQ9BU02 230 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 ANKRD19PQ9H560 264 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 UBTD1Q9HAC8 227 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 INIPQ9NRY2 104 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 PRPF19Q9UMS4 504 aaKnown RBP7.46□□□□□ -1.22
TMEM258-201ENST00000257262 EDARQ9UNE0 448 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 HIF3AQ9Y2N7 669 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 AMDHD2Q9Y303 409 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 ABCA12Q86UK0 2595 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 CREBBPQ92793 2442 aa7.46□□□□□ -1.22
TMEM258-201ENST00000257262 TRAV27A0A087WT01 109 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 TRBV4-1A0A0J9YWV2 114 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 A0A1W2PRG6 482 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 A0A1W2PRQ8 180 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ZNF99A8MXY4 864 aaPredicted RBP7.45□□□□□ -1.22
TMEM258-201ENST00000257262 EFCAB9A8MZ26 197 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 M0R1B8 84 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 CDC42EP2O14613 210 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ABCD4O14678 606 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 GYG2O15488 501 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 CLOCKO15516 846 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 SEC14L2O76054 403 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 GADD45GO95257 159 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 ATE1O95260 518 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 WNT11O96014 354 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 CD53P19397 219 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 DNASE1P24855 282 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 HOXC12P31275 282 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 GPR4P46093 362 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 CSNK1A1P48729 337 aa7.45□□□□□ -1.22
TMEM258-201ENST00000257262 TUBA1BP68363 451 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms