RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 MEPEQ9NQ76 525 aaPredicted RBP18.42■□□□□ 0.54
HCFC1R1-201ENST00000248089 RIMS3Q9UJD0 308 aa18.42■□□□□ 0.54
HCFC1R1-201ENST00000248089 ZNF229Q9UJW7 825 aa18.42■□□□□ 0.54
HCFC1R1-201ENST00000248089 TLN2Q9Y4G6 2542 aa18.42■□□□□ 0.54
HCFC1R1-201ENST00000248089 FAM171A2A8MVW0 826 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 NME4O00746 187 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 LY6G6DO95868 133 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 CRYAAP02489 173 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 PAX7P23759 505 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 CSNK1A1P48729 337 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 IDH3GP51553 393 aaPredicted RBP18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 NPRL3Q12980 569 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 TNK1Q13470 666 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 MELKQ14680 651 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 SLC46A3Q7Z3Q1 461 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 LZICQ8WZA0 190 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 LRR1Q96L50 414 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 ADAD1Q96M93 576 aaKnown RBP18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 KATNB1Q9BVA0 655 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 SEC61A2Q9H9S3 476 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 EFCAB1Q9HAE3 211 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 BARX1Q9HBU1 254 aaPredicted RBP18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 TAS2R5Q9NYW4 299 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 POFUT2Q9Y2G5 429 aa18.41■□□□□ 0.54
HCFC1R1-201ENST00000248089 ZNF503-AS2A6NEH8 195 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 BLOC1S5-TXNDC5H3BN57 136 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 ZNF682O95780 498 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 MT-ND1P03886 318 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 HEXAP06865 529 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 CELA3BP08861 270 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 ASAH2BP0C7U1 165 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 HOXB1P14653 301 aaPredicted RBP18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 RBM34P42696 430 aaKnown RBP18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 SELENOWP63302 87 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 NAAAQ02083 359 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 NHLRC1Q6VVB1 395 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 ZNF813Q6ZN06 617 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 TMEM239Q8WW34 195 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 HTRA1Q92743 480 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 HOPXQ9BPY8 73 aaPredicted RBP18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 MOV10Q9HCE1 1003 aaKnown RBP18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 CRNNQ9UBG3 495 aaPredicted RBP18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 CR1P17927 2039 aa18.4■□□□□ 0.54
HCFC1R1-201ENST00000248089 CXCR6O00574 342 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 SSX4O60224 188 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 OR7A10O76100 309 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 B4GALT1P15291 398 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 APOBEC3AP31941 199 aaPredicted RBP18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 NUDT6P53370 316 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 ZP4Q12836 540 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 VHLLQ6RSH7 139 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 VTCN1Q7Z7D3 282 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 MDP1Q86V88 176 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 MYPOPQ86VE0 399 aaPredicted RBP18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 FBXO17Q96EF6 278 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 SGTBQ96EQ0 304 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 C20orf141Q9NUB4 165 aa18.39■□□□□ 0.53
HCFC1R1-201ENST00000248089 ARFGEF3Q5TH69 2177 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 RNF223E7ERA6 249 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 PIP5K1CO60331 668 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 IGKV3-15P01624 115 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 IGLV1-44P01699 117 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 HLA-HP01893 362 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 CD79AP11912 226 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 CBR1P16152 277 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 CALCRP30988 508 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 LSP1P33241 339 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 YAP1P46937 504 aaKnown RBP18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 GSK3BP49841 420 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 CHRNB3Q05901 458 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 C3orf36Q3SXR2 165 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 HACD2Q6Y1H2 254 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 CPLX4Q7Z7G2 160 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 MAPK1IP1LQ8NDC0 245 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 OR6X1Q8NH79 312 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 ZNF566Q969W8 418 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 CMTM5Q96DZ9 223 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 PRRC1Q96M27 445 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 FOXB1Q99853 325 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 KCTD14Q9BQ13 255 aaPredicted RBP18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 MYLK2Q9H1R3 596 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 MED31Q9Y3C7 131 aa18.38■□□□□ 0.53
HCFC1R1-201ENST00000248089 IFNW1P05000 195 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 F13BP05160 661 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 THRBP10828 461 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 FUT1P19526 365 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 DRD4P21917 467 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 IFNA8P32881 189 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 ARR3P36575 388 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 GYS2P54840 703 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 RPL18Q07020 188 aaKnown RBP18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 ST3GAL3Q11203 375 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 RAB35Q15286 201 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 C8orf82Q6P1X6 216 aaPredicted RBP18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 CCDC36Q8IYA8 594 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 FAM169BQ8N8A8 192 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 NANOS1Q8WY41 292 aaKnown RBP18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 FAM162AQ96A26 154 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 CA10Q9NS85 328 aa18.37■□□□□ 0.53
HCFC1R1-201ENST00000248089 GLTPQ9NZD2 209 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms