RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 TRAPPC2BP0DI82 140 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 EPXP11678 715 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 IMPDH2P12268 514 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 NAGAP17050 411 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 ALKBH1Q13686 389 aaKnown RBP13.68□□□□□ -0.22
DDX49-201ENST00000247003 MFSD13AQ14CX5 517 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 ACKR1Q16570 336 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 ZNF684Q5T5D7 378 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 HACD4Q5VWC8 232 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 C1QL3Q5VWW1 255 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 BPHLQ86WA6 291 aaPredicted RBP13.68□□□□□ -0.22
DDX49-201ENST00000247003 KCNJ15Q99712 375 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 WACQ9BTA9 647 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 TXNIPQ9H3M7 391 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 CCDC86Q9H6F5 360 aaKnown RBP13.68□□□□□ -0.22
DDX49-201ENST00000247003 NOX4Q9NPH5 578 aa13.68□□□□□ -0.22
DDX49-201ENST00000247003 PRMT8Q9NR22 394 aaPredicted RBP13.68□□□□□ -0.22
DDX49-201ENST00000247003 PRSS37A4D1T9 235 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 ZNF432O94892 652 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 PAHP00439 452 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 SRMP19623 302 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 APOBEC1P41238 236 aaKnown RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 NR4A2P43354 598 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 KIR2DL3P43628 341 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 CLPPQ16740 277 aaPredicted RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 LIPNQ5VXI9 398 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 UNQ9370/PRO34162Q6UXP9 181 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 PRR23CQ6ZRP0 262 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 DPY19L4Q7Z388 723 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 SLC22A8Q8TCC7 542 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 THEM6Q8WUY1 208 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 TTC9Q92623 222 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 DDIT4LQ96D03 193 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 MOV10Q9HCE1 1003 aaKnown RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 SDHAF3Q9NRP4 125 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 MRPL39Q9NYK5 338 aaKnown RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 AK6Q9Y3D8 172 aaKnown RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 ACOD1A6NK06 481 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 VSTM2BA6NLU5 285 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 ZFAND5O76080 213 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 DXOO77932 396 aaKnown RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 ZFPL1O95159 310 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 CER1O95813 267 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 IGHMP01871 453 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 ATF1P18846 271 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 DUSP3P51452 185 aaPredicted RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 NANOS3P60323 173 aaKnown RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 Q499Y3 187 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 OR5M10Q6IEU7 315 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 C16orf47Q6ZP98 133 aaPredicted RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 OR6S1Q8NH40 331 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 ZNF417Q8TAU3 575 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 ZNF519Q8TB69 540 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 NSMAFQ92636 917 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 THRSPQ92748 146 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 PMEPA1Q969W9 287 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 ZNF587Q96SQ5 575 aaPredicted RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 THAP7Q9BT49 309 aaPredicted RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 MRI1Q9BV20 369 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 OR11A1Q9GZK7 315 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 TCF7L1Q9HCS4 588 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 PPP4R1LQ9P1A2 415 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 GPN3Q9UHW5 284 aaPredicted RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 MRM2Q9UI43 246 aaKnown RBP13.67□□□□□ -0.22
DDX49-201ENST00000247003 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 KLHDC2Q9Y2U9 406 aa13.67□□□□□ -0.22
DDX49-201ENST00000247003 CACNA1EQ15878 2313 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 EXPH5Q8NEV8 1989 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 PLPP3O14495 311 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 AKR7A3O95154 331 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 UBL3O95164 117 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 ONECUT2O95948 504 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 SNRPBP14678 240 aaKnown RBP13.66□□□□□ -0.22
DDX49-201ENST00000247003 ZNF41P51814 821 aaPredicted RBP13.66□□□□□ -0.22
DDX49-201ENST00000247003 RASGEF1BQ0VAM2 473 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 UBE2NLQ5JXB2 153 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 ZNF385CQ66K41 422 aaPredicted RBP13.66□□□□□ -0.22
DDX49-201ENST00000247003 DUSP18Q8NEJ0 188 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 OTOSQ8NHW6 89 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 UBASH3BQ8TF42 649 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 ASB17Q8WXJ9 295 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 HGDQ93099 445 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 NXPE2Q96DL1 559 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 CMTM3Q96MX0 182 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 DERL3Q96Q80 235 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 SPSB2Q99619 263 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 SLC26A1Q9H2B4 701 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 ZCCHC4Q9H5U6 513 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 NXT1Q9UKK6 140 aaKnown RBP13.66□□□□□ -0.22
DDX49-201ENST00000247003 SPATA2Q9UM82 520 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 CLEC4AQ9UMR7 237 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 B9D1Q9UPM9 204 aa13.66□□□□□ -0.22
DDX49-201ENST00000247003 ARID1BQ8NFD5 2236 aaPredicted RBP13.66□□□□□ -0.22
DDX49-201ENST00000247003 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.65□□□□□ -0.22
DDX49-201ENST00000247003 HMX3A6NHT5 357 aa13.65□□□□□ -0.22
DDX49-201ENST00000247003 A6NIZ1 184 aa13.65□□□□□ -0.22
DDX49-201ENST00000247003 TMEM212A6NML5 194 aa13.65□□□□□ -0.22
DDX49-201ENST00000247003 CENPXA8MT69 81 aa13.65□□□□□ -0.22
DDX49-201ENST00000247003 PRR32B1ATL7 298 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms